RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 GFI1BQ5VTD9 330 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 Q86TA4 180 aa17.53■□□□□ 0.4
APOE-202ENST00000425718 TRAV34A0A0B4J273 112 aa17.52■□□□□ 0.4
APOE-202ENST00000425718 MED9Q9NWA0 146 aa17.52■□□□□ 0.4
APOE-202ENST00000425718 NBEAL2Q6ZNJ1 2754 aa17.51■□□□□ 0.39
APOE-202ENST00000425718 J3KRW8 73 aa17.51■□□□□ 0.39
APOE-202ENST00000425718 RNASE4P34096 147 aaKnown RBP17.51■□□□□ 0.39
APOE-202ENST00000425718 PEA15Q15121 130 aa17.51■□□□□ 0.39
APOE-202ENST00000425718 LINC01587Q99440 93 aa17.51■□□□□ 0.39
APOE-202ENST00000425718 PYGO2Q9BRQ0 406 aa17.51■□□□□ 0.39
APOE-202ENST00000425718 U3KQK5 164 aa17.51■□□□□ 0.39
APOE-202ENST00000425718 TRAV21A0A0B4J279 112 aa17.5■□□□□ 0.39
APOE-202ENST00000425718 LTAP01374 205 aa17.5■□□□□ 0.39
APOE-202ENST00000425718 Q6AWC8 147 aa17.5■□□□□ 0.39
APOE-202ENST00000425718 C1orf158Q8N1D5 194 aa17.5■□□□□ 0.39
APOE-202ENST00000425718 PCNPQ8WW12 178 aaKnown RBP17.5■□□□□ 0.39
APOE-202ENST00000425718 SMIM12Q96EX1 92 aa17.5■□□□□ 0.39
APOE-202ENST00000425718 SGK494Q96LW2 274 aa17.5■□□□□ 0.39
APOE-202ENST00000425718 LINC00479Q96M42 142 aa17.5■□□□□ 0.39
APOE-202ENST00000425718 IGHV3OR16-12A0A075B7B8 117 aa17.49■□□□□ 0.39
APOE-202ENST00000425718 TRAV12-3A0A0B4J271 114 aa17.49■□□□□ 0.39
APOE-202ENST00000425718 RPL35P42766 123 aaKnown RBP17.49■□□□□ 0.39
APOE-202ENST00000425718 RETNQ9HD89 108 aa17.49■□□□□ 0.39
APOE-202ENST00000425718 DNAH9Q9NYC9 4486 aa17.49■□□□□ 0.39
APOE-202ENST00000425718 TMEM189A5PLL7 270 aa17.48■□□□□ 0.39
APOE-202ENST00000425718 RGS13O14921 159 aa17.48■□□□□ 0.39
APOE-202ENST00000425718 BTN1A1Q13410 526 aa17.48■□□□□ 0.39
APOE-202ENST00000425718 RRN3P1Q2M238 152 aa17.48■□□□□ 0.39
APOE-202ENST00000425718 COX8CQ7Z4L0 72 aa17.48■□□□□ 0.39
APOE-202ENST00000425718 TMEM183AQ8IXX5 376 aa17.48■□□□□ 0.39
APOE-202ENST00000425718 LINC00467Q9BRT7 94 aa17.48■□□□□ 0.39
APOE-202ENST00000425718 BAGE2Q86Y30 109 aa17.47■□□□□ 0.39
APOE-202ENST00000425718 TVP23CQ96ET8 276 aa17.47■□□□□ 0.39
APOE-202ENST00000425718 BIN3Q9NQY0 253 aa17.47■□□□□ 0.39
APOE-202ENST00000425718 ZNF324O75467 553 aaPredicted RBP17.46■□□□□ 0.39
APOE-202ENST00000425718 ZNF493Q6ZR52 646 aa17.46■□□□□ 0.39
APOE-202ENST00000425718 C11orf68Q9H3H3 251 aaKnown RBP17.46■□□□□ 0.39
APOE-202ENST00000425718 RAB19A4D1S5 217 aa17.45■□□□□ 0.38
APOE-202ENST00000425718 GCGP01275 180 aa17.45■□□□□ 0.38
APOE-202ENST00000425718 PFN1P07737 140 aaKnown RBP17.45■□□□□ 0.38
APOE-202ENST00000425718 GNG4P50150 75 aa17.45■□□□□ 0.38
APOE-202ENST00000425718 KIR3DS1Q14943 382 aa17.45■□□□□ 0.38
APOE-202ENST00000425718 X6R8D5 127 aa17.45■□□□□ 0.38
APOE-202ENST00000425718 PRR9Q5T870 116 aa17.44■□□□□ 0.38
APOE-202ENST00000425718 KCNS1Q96KK3 526 aa17.44■□□□□ 0.38
APOE-202ENST00000425718 C8orf49Q96NF6 230 aa17.44■□□□□ 0.38
APOE-202ENST00000425718 FABP5P3A8MUU1 101 aa17.43■□□□□ 0.38
APOE-202ENST00000425718 FAM159AQ6UWV7 190 aa17.43■□□□□ 0.38
APOE-202ENST00000425718 EIF4E3Q8N5X7 224 aaKnown RBP17.43■□□□□ 0.38
APOE-202ENST00000425718 C16orf74Q96GX8 76 aa17.43■□□□□ 0.38
APOE-202ENST00000425718 IGHV1OR15-1A0A075B7D0 117 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 TEX48A0A1B0GUV7 120 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 C9JCJ5 164 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 RBMY1A1P0DJD3 496 aaKnown RBP17.42■□□□□ 0.38
APOE-202ENST00000425718 RBMY1CP0DJD4 496 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 RBMY1FQ15415 496 aaKnown RBP17.42■□□□□ 0.38
APOE-202ENST00000425718 ANXA2RQ3ZCQ2 193 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 CENPWQ5EE01 88 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 FAM162BQ5T6X4 162 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 Q8NAQ8 132 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 TMEM263Q8WUH6 116 aaKnown RBP17.42■□□□□ 0.38
APOE-202ENST00000425718 PARLQ9H300 379 aa17.42■□□□□ 0.38
APOE-202ENST00000425718 SRP19P09132 144 aaKnown RBP17.41■□□□□ 0.38
APOE-202ENST00000425718 FAM74A3Q4VXF1 159 aa17.41■□□□□ 0.38
APOE-202ENST00000425718 DERL1Q9BUN8 251 aa17.41■□□□□ 0.38
APOE-202ENST00000425718 MLST8Q9BVC4 326 aa17.41■□□□□ 0.38
APOE-202ENST00000425718 COL7A1Q02388 2944 aa17.41■□□□□ 0.38
APOE-202ENST00000425718 IGHV4-28A0A0C4DH34 117 aa17.4■□□□□ 0.38
APOE-202ENST00000425718 TDRG1Q3Y452 100 aa17.4■□□□□ 0.38
APOE-202ENST00000425718 HUWE1Q7Z6Z7 4374 aaKnown RBP17.4■□□□□ 0.38
APOE-202ENST00000425718 TENM3Q9P273 2699 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 TRGV11A0A075B6L2 103 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 CBY3A6NI87 242 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 ZNF705GA8MUZ8 300 aaPredicted RBP17.39■□□□□ 0.37
APOE-202ENST00000425718 HTN1P15515 57 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 CEBPGP53567 150 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 ZNF674Q2M3X9 581 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 ZC2HC1AQ96GY0 325 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 SDF2L1Q9HCN8 221 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 LY96Q9Y6Y9 160 aa17.39■□□□□ 0.37
APOE-202ENST00000425718 SMIM7Q9BQ49 75 aa17.38■□□□□ 0.37
APOE-202ENST00000425718 IBA57Q5T440 356 aaKnown RBP17.37■□□□□ 0.37
APOE-202ENST00000425718 UQCC3Q6UW78 93 aa17.37■□□□□ 0.37
APOE-202ENST00000425718 NAGKQ9UJ70 344 aa17.37■□□□□ 0.37
APOE-202ENST00000425718 ZNF727A8MUV8 499 aa17.36■□□□□ 0.37
APOE-202ENST00000425718 SNURFLB1AK76 121 aa17.36■□□□□ 0.37
APOE-202ENST00000425718 ZNF80P51504 273 aaPredicted RBP17.36■□□□□ 0.37
APOE-202ENST00000425718 RNASE8Q8TDE3 154 aaKnown RBP17.36■□□□□ 0.37
APOE-202ENST00000425718 DAZAP1Q96EP5 407 aaKnown RBP17.36■□□□□ 0.37
APOE-202ENST00000425718 A0A0J9YWU9 116 aa17.35■□□□□ 0.37
APOE-202ENST00000425718 MGST1P10620 155 aaKnown RBP17.35■□□□□ 0.37
APOE-202ENST00000425718 ZNF415Q09FC8 603 aa17.35■□□□□ 0.37
APOE-202ENST00000425718 NHLRC2Q8NBF2 726 aa17.35■□□□□ 0.37
APOE-202ENST00000425718 IL17DQ8TAD2 202 aa17.35■□□□□ 0.37
APOE-202ENST00000425718 TGP01266 2768 aa17.34■□□□□ 0.37
APOE-202ENST00000425718 SH2D1AO60880 128 aa17.34■□□□□ 0.37
APOE-202ENST00000425718 SOHLH1Q5JUK2 328 aa17.34■□□□□ 0.37
APOE-202ENST00000425718 MUC21Q5SSG8 566 aa17.34■□□□□ 0.37
APOE-202ENST00000425718 STAB2Q8WWQ8 2551 aa17.34■□□□□ 0.37
APOE-202ENST00000425718 TIMM8BQ9Y5J9 83 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms