RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SCRT2Q9NQ03 307 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 C1RLQ9NZP8 487 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 A0A1B0GUT8 65 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 A0A1W2PPR1 153 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 CCDC179H3BU77 68 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 TNFRSF6BO95407 300 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 ECSCRQ19T08 205 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 MINOS1Q5TGZ0 78 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 FANCD2OSQ96PS1 177 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 SPAG8Q99932 426 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-205ENST00000425443 MINOS1-NBL1R4GNA1 71 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 IGLV11-55A0A075B6I3 123 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 IGHV3-49A0A0A0MS15 119 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 TMEM213A2RRL7 107 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 INSL3P51460 131 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 C8orf86Q6ZUL3 223 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 PRSS3P2Q8NHM4 247 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
COL12A1-205ENST00000425443 SOX21Q9Y651 276 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-205ENST00000425443 A0A0G2JLM5 398 aa10.12□□□□□ -0.79
COL12A1-205ENST00000425443 OOSP1A8MZH6 123 aa10.12□□□□□ -0.79
COL12A1-205ENST00000425443 MRPS12O15235 138 aaKnown RBP10.12□□□□□ -0.79
COL12A1-205ENST00000425443 A0A096LNJ9 63 aa10.12□□□□□ -0.79
COL12A1-205ENST00000425443 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
COL12A1-205ENST00000425443 CSPG4Q6UVK1 2322 aa10.12□□□□□ -0.79
COL12A1-205ENST00000425443 EFNA4P52798 201 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 SRSF1Q07955 248 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL12A1-205ENST00000425443 ETDBQ3ZM63 59 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 TTC9CQ8N5M4 171 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 OR8A1Q8NGG7 326 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 ZNF414Q96IQ9 312 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 SMKR1H3BMG3 65 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 SLC25A34Q6PIV7 304 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 TMEM75Q8N9X5 138 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 BPESC1Q9GZL8 116 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 CREBBPQ92793 2442 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 WI2-2373I1.2A0A1W2PRP0 233 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 C9orf118A6NHY6 69 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 K7EMI3 77 aa10.11□□□□□ -0.79
COL12A1-205ENST00000425443 IFI27P40305 119 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-205ENST00000425443 WFDC2Q14508 124 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 FA2HQ7L5A8 372 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 MAP1LC3CQ9BXW4 147 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
COL12A1-205ENST00000425443 PPIFP30405 207 aaKnown RBP10.1□□□□□ -0.79
COL12A1-205ENST00000425443 LYZL1Q6UWQ5 148 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 AMN1Q8IY45 258 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 AP5S1Q9NUS5 200 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 CENPEQ02224 2701 aa10.1□□□□□ -0.79
COL12A1-205ENST00000425443 IGHV7-81A0A0B4J1V7 117 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 SAA4P35542 130 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 FAM162BQ5T6X4 162 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 SIRPDQ9H106 197 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 D6R8Y8 96 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 GPR183P32249 361 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 C2orf91Q6ZV80 131 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 ZNF747Q9BV97 191 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 A0A087WX48 190 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 OR5AL1P0C617 328 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 GNLYP22749 145 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 UBE2E1P51965 193 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 RIGQ13278 110 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 TMEM191AQ9H0A3 160 aa10.09□□□□□ -0.79
COL12A1-205ENST00000425443 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
COL12A1-205ENST00000425443 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
COL12A1-205ENST00000425443 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-205ENST00000425443 C15orf32Q32M92 178 aa10.08□□□□□ -0.8
COL12A1-205ENST00000425443 ZNF575Q86XF7 245 aa10.08□□□□□ -0.8
COL12A1-205ENST00000425443 Q8N9W7 124 aa10.08□□□□□ -0.8
COL12A1-205ENST00000425443 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
COL12A1-205ENST00000425443 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
COL12A1-205ENST00000425443 PDE6HQ13956 83 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 RNF182Q8N6D2 247 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 Q8N6K4 173 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 VGLL1Q99990 258 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 CACNA1AO00555 2505 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 SMIM9A6NGZ8 99 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 SH2D1AO60880 128 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 GAGE7O76087 117 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 ORM1P02763 201 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 CTSGP08311 255 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 GAGE4Q13068 117 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 TWIST1Q15672 202 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 SYT8Q8NBV8 401 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 CRYBG3Q68DQ2 2970 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 FABP5P3A8MUU1 101 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 ERCC8Q13216 396 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 EBI3Q14213 229 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms