RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 OR10AG1Q8NH19 301 aa9.14□□□□□ -0.95
PTPRN-204ENST00000423636 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
PTPRN-204ENST00000423636 IGLL1P15814 213 aa9.14□□□□□ -0.95
PTPRN-204ENST00000423636 TEX43Q6ZNM6 134 aa9.14□□□□□ -0.95
PTPRN-204ENST00000423636 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 C2orf70A6NJV1 201 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
PTPRN-204ENST00000423636 CKS2P33552 79 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 HIST1H1AQ02539 215 aaPredicted RBP9.13□□□□□ -0.95
PTPRN-204ENST00000423636 KHDC1LQ5JSQ8 128 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 FER1L6-AS1Q8NA97 138 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 OR4C46A6NHA9 309 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 M0R381 172 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 NPYP01303 97 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 SRSF8Q9BRL6 282 aaKnown RBP9.13□□□□□ -0.95
PTPRN-204ENST00000423636 ZNF492Q9P255 531 aa9.13□□□□□ -0.95
PTPRN-204ENST00000423636 NPIPB6E9PJ23 425 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 H3BVH4 76 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 PRM2P04554 102 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 BTF3P20290 206 aaKnown RBP9.12□□□□□ -0.95
PTPRN-204ENST00000423636 RIGQ13278 110 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 ZNF124Q15973 351 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 C18orf65Q6ZTR6 163 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 ZNF575Q86XF7 245 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 KIR2DL5BA0A0G2JN68 375 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 KIR2DL5BA0A0G2JPC4 375 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 PSG9Q00887 426 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 FA2HQ7L5A8 372 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 KIR2DL5AQ8N109 375 aa9.12□□□□□ -0.95
PTPRN-204ENST00000423636 OOSP1A8MZH6 123 aa9.11□□□□□ -0.95
PTPRN-204ENST00000423636 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
PTPRN-204ENST00000423636 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
PTPRN-204ENST00000423636 FLNBO75369 2602 aaKnown RBP9.11□□□□□ -0.95
PTPRN-204ENST00000423636 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
PTPRN-204ENST00000423636 M0R143 59 aa9.11□□□□□ -0.95
PTPRN-204ENST00000423636 ESDP10768 282 aa9.11□□□□□ -0.95
PTPRN-204ENST00000423636 SETXQ7Z333 2677 aaKnown RBP9.11□□□□□ -0.95
PTPRN-204ENST00000423636 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
PTPRN-204ENST00000423636 MIEN1Q9BRT3 115 aa9.11□□□□□ -0.95
PTPRN-204ENST00000423636 HAX1O00165 279 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 RNASE4P34096 147 aaKnown RBP9.1□□□□□ -0.95
PTPRN-204ENST00000423636 STPG4Q8N801 248 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 AP5S1Q9NUS5 200 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 SIGLEC8Q9NYZ4 499 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 TRAV12-2A0A075B6T6 113 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 RPLP1P05386 114 aaKnown RBP9.1□□□□□ -0.95
PTPRN-204ENST00000423636 HNRNPA3P51991 378 aaKnown RBP9.1□□□□□ -0.95
PTPRN-204ENST00000423636 ATP5L2Q7Z4Y8 100 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 TMEM70Q9BUB7 260 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 GNRH2O43555 120 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 NEGR1Q7Z3B1 354 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 TTTY13Q9BZ97 58 aa9.1□□□□□ -0.95
PTPRN-204ENST00000423636 ZNF688P0C7X2 276 aa9.09□□□□□ -0.95
PTPRN-204ENST00000423636 RHPN1-AS1Q9BWJ2 59 aa9.09□□□□□ -0.95
PTPRN-204ENST00000423636 SYS1-DBNDD2H3BUS1 97 aa9.09□□□□□ -0.95
PTPRN-204ENST00000423636 IGLC3P0DOY3 106 aa9.09□□□□□ -0.95
PTPRN-204ENST00000423636 LINC00477Q96M19 166 aa9.09□□□□□ -0.95
PTPRN-204ENST00000423636 NDFIP1Q9BT67 221 aa9.09□□□□□ -0.95
PTPRN-204ENST00000423636 UNC79Q9P2D8 2635 aa9.09□□□□□ -0.95
PTPRN-204ENST00000423636 FABP5P3A8MUU1 101 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 RAB9AP51151 201 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 PDE6HQ13956 83 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 GPHB5Q86YW7 130 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 JPT2Q9H910 190 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 RNF24Q9Y225 148 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 K7EMI3 77 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 SCGB2A1O75556 95 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 OR5AL1P0C617 328 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 COX6B1P14854 86 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 COX19Q49B96 90 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 ZNF843Q8N446 348 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 OR4B1Q8NGF8 309 aa9.08□□□□□ -0.96
PTPRN-204ENST00000423636 B4DSR2 109 aa9.07□□□□□ -0.96
PTPRN-204ENST00000423636 SYNJ2BPP57105 145 aa9.07□□□□□ -0.96
PTPRN-204ENST00000423636 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
PTPRN-204ENST00000423636 SAPCD1Q5SSQ6 148 aa9.07□□□□□ -0.96
PTPRN-204ENST00000423636 SPANXN1Q5VSR9 72 aa9.07□□□□□ -0.96
PTPRN-204ENST00000423636 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
PTPRN-204ENST00000423636 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
PTPRN-204ENST00000423636 VWFP04275 2813 aa9.07□□□□□ -0.96
PTPRN-204ENST00000423636 A0A087X0K7 114 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 TRBV7-1A0A0A6YYK4 115 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 A0A1W2PRX2 142 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 S100A4P26447 101 aaKnown RBP9.06□□□□□ -0.96
PTPRN-204ENST00000423636 CTRLP40313 264 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 CACNG7P62955 275 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 CT83Q5H943 113 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 NPFFR1Q9GZQ6 430 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 GFRA4Q9GZZ7 299 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 OTOGQ6ZRI0 2925 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 HOXA3O43365 443 aaPredicted RBP9.06□□□□□ -0.96
PTPRN-204ENST00000423636 A6NDX4 124 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 MGPP08493 103 aa9.06□□□□□ -0.96
PTPRN-204ENST00000423636 NUTF2P61970 127 aaKnown RBP9.06□□□□□ -0.96
PTPRN-204ENST00000423636 SRSF2Q01130 221 aaKnown RBP9.06□□□□□ -0.96
PTPRN-204ENST00000423636 C14orf178Q8N769 122 aaPredicted RBP9.06□□□□□ -0.96
PTPRN-204ENST00000423636 A0A096LNJ9 63 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 RASL11AQ6T310 242 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms