RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TMEM191AQ9H0A3 160 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.76
MCF2L-213ENST00000421756 K7EMI3 77 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 HAX1O00165 279 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 SCGB2A1O75556 95 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 AGPAT4-IT1Q9H0P7 198 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 IGHG4P01861 327 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 RASL11AQ6T310 242 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 TRAV41A0A0B4J266 112 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 H3BVH4 76 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 ARL3P36405 182 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 KLF5Q13887 457 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-213ENST00000421756 TMEM78Q5T7P6 136 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 ZNF502Q8TBZ5 544 aa10.3□□□□□ -0.76
MCF2L-213ENST00000421756 BUB3O43684 328 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 PRSS1P07477 247 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 HIST1H1AQ02539 215 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-213ENST00000421756 LBHQ53QV2 105 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-213ENST00000421756 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 PTTG1IPP53801 180 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 MINOS1Q5TGZ0 78 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 ORMDL3Q8N138 153 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 MINOS1-NBL1R4GNA1 71 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 SMAD7O15105 426 aaKnown RBP10.29□□□□□ -0.76
MCF2L-213ENST00000421756 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
MCF2L-213ENST00000421756 S100A7AQ86SG5 101 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 EEF1AKMT3Q96AZ1 226 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
MCF2L-213ENST00000421756 NPIPB6E9PJ23 425 aa10.28□□□□□ -0.76
MCF2L-213ENST00000421756 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
MCF2L-213ENST00000421756 FABP5P3A8MUU1 101 aa10.28□□□□□ -0.76
MCF2L-213ENST00000421756 DLEU1O43261 78 aa10.28□□□□□ -0.76
MCF2L-213ENST00000421756 CT83Q5H943 113 aa10.28□□□□□ -0.76
MCF2L-213ENST00000421756 Q8N6K4 173 aa10.28□□□□□ -0.76
MCF2L-213ENST00000421756 RAB37Q96AX2 223 aa10.28□□□□□ -0.76
MCF2L-213ENST00000421756 PAX8Q06710 450 aa10.27□□□□□ -0.76
MCF2L-213ENST00000421756 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.76
MCF2L-213ENST00000421756 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.76
MCF2L-213ENST00000421756 CLEC2AQ6UVW9 174 aa10.27□□□□□ -0.76
MCF2L-213ENST00000421756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.27□□□□□ -0.76
MCF2L-213ENST00000421756 FLNAP21333 2647 aaKnown RBP10.27□□□□□ -0.76
MCF2L-213ENST00000421756 FAM110DQ8TAY7 271 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-213ENST00000421756 AJUBAQ96IF1 538 aa10.27□□□□□ -0.77
MCF2L-213ENST00000421756 GFRA4Q9GZZ7 299 aa10.27□□□□□ -0.77
MCF2L-213ENST00000421756 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.77
MCF2L-213ENST00000421756 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
MCF2L-213ENST00000421756 AVPP01185 164 aa10.27□□□□□ -0.77
MCF2L-213ENST00000421756 SLC25A34Q6PIV7 304 aa10.27□□□□□ -0.77
MCF2L-213ENST00000421756 DKK2Q9UBU2 259 aa10.27□□□□□ -0.77
MCF2L-213ENST00000421756 M0QZK8 103 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 OVOL3O00110 214 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 MGPP08493 103 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 C5orf56Q8N8D9 126 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 C7orf71A4D174 169 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 RNASE4P34096 147 aaKnown RBP10.26□□□□□ -0.77
MCF2L-213ENST00000421756 BMI1P35226 326 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 LEPP41159 167 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 NEGR1Q7Z3B1 354 aa10.26□□□□□ -0.77
MCF2L-213ENST00000421756 CLPSL1A2RUU4 121 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 LYPD1Q8N2G4 141 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
MCF2L-213ENST00000421756 PAX2Q02962 417 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 SRSF8Q9BRL6 282 aaKnown RBP10.25□□□□□ -0.77
MCF2L-213ENST00000421756 ZNF747Q9BV97 191 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 ZFAND3Q9H8U3 227 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 RNF151Q2KHN1 245 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 KHDC1LQ5JSQ8 128 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 PIMREGQ9BSJ6 248 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 HECTD1Q9ULT8 2610 aa10.25□□□□□ -0.77
MCF2L-213ENST00000421756 IGHV1-69DA0A0B4J2H0 117 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 IGKV3D-20A0A0C4DH25 116 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 IGHV1-69P01742 117 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 PDE6HQ13956 83 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 SMIM12Q96EX1 92 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 C20orf173Q96LM9 149 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 TGFAP01135 160 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 PRR9Q5T870 116 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 C11orf44Q8N8P7 122 aa10.24□□□□□ -0.77
MCF2L-213ENST00000421756 OR4X2Q8NGF9 303 aa10.23□□□□□ -0.77
MCF2L-213ENST00000421756 MOB4Q9Y3A3 225 aa10.23□□□□□ -0.77
MCF2L-213ENST00000421756 FBLL1A6NHQ2 334 aaKnown RBP10.23□□□□□ -0.77
MCF2L-213ENST00000421756 PCP2Q8IVA1 136 aa10.23□□□□□ -0.77
MCF2L-213ENST00000421756 C14orf178Q8N769 122 aaPredicted RBP10.23□□□□□ -0.77
MCF2L-213ENST00000421756 ITPR3Q14573 2671 aa10.23□□□□□ -0.77
MCF2L-213ENST00000421756 GNRH2O43555 120 aa10.23□□□□□ -0.77
MCF2L-213ENST00000421756 TMEM160Q9NX00 188 aa10.23□□□□□ -0.77
MCF2L-213ENST00000421756 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 K7EP13 123 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 C1orf122Q6ZSJ8 110 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 A0A096LNJ9 63 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 IGHV4-59P01825 116 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 FCER1GP30273 86 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 IFI27L1Q96BM0 104 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 FOXC2Q99958 501 aa10.22□□□□□ -0.77
MCF2L-213ENST00000421756 TNFRSF6BO95407 300 aa10.21□□□□□ -0.77
MCF2L-213ENST00000421756 EMP1P54849 157 aa10.21□□□□□ -0.77
MCF2L-213ENST00000421756 TRAV12-2A0A075B6T6 113 aa10.21□□□□□ -0.77
MCF2L-213ENST00000421756 FAM231BA6NCW3 169 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms