RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 ATP7BP35670 1465 aa1.67□□□□□ -2.14
VPS8-202ENST00000421069 CDK12Q9NYV4 1490 aaPredicted RBP1.67□□□□□ -2.14
VPS8-202ENST00000421069 ADGRB2O60241 1585 aa1.67□□□□□ -2.14
VPS8-202ENST00000421069 DISP2A7MBM2 1401 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 EDC4Q6P2E9 1401 aaKnown RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 SORL1Q92673 2214 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 TRAV30A0A087WSZ9 112 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 SPAARA0A1B0GVQ0 90 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 TMEM218A2RU14 115 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 CCL25O15444 150 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 UBL3O95164 117 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 TRGC2P03986 189 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 RAB5CP51148 216 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 COPZ1P61923 177 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 RPS28P62857 69 aaKnown RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 CCSMST1Q4G0I0 132 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 GLYATL3Q5SZD4 288 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 RPS19BP1Q86WX3 136 aaKnown RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 LINC00311Q8N616 119 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 TCTEX1D1Q8N7M0 179 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 OR51A4Q8NGJ6 313 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 AP1S3Q96PC3 154 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 GPX7Q96SL4 187 aaPredicted RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 SLC25A21Q9BQT8 299 aaPredicted RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 SNHG12Q9BXW3 62 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 Q9H521 79 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 OR5AC2Q9NZP5 309 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 HS3ST2Q9Y278 367 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 MED31Q9Y3C7 131 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 ANKRD36BQ8N2N9 1353 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 KIF1AQ12756 1690 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 SBF1O95248 1867 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 MDC1Q14676 2089 aaKnown RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 XRN1Q8IZH2 1706 aaKnown RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 ARHGEF28Q8N1W1 1705 aaKnown RBP1.66□□□□□ -2.14
VPS8-202ENST00000421069 NRXN3Q9Y4C0 1643 aa1.66□□□□□ -2.14
VPS8-202ENST00000421069 NUP210LQ5VU65 1888 aa1.65□□□□□ -2.14
VPS8-202ENST00000421069 CDK5RAP2Q96SN8 1893 aa1.65□□□□□ -2.14
VPS8-202ENST00000421069 SHPRHQ149N8 1683 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 QRICH2Q9H0J4 1663 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 TRAV14DV4A0A0A6YYC5 116 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 TRAV5A0A0B4J249 113 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 LOC100130705A0A1B0GUX0 176 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 TRDV1A0A1B0GX56 115 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 C2orf70A6NJV1 201 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 H3BQF6 201 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 GABARAPH6UMI1 98 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 H7BYZ3 331 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 J3QR89 54 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 DPM2O94777 84 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 CXCL1P09341 107 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 HIST1H1BP16401 226 aaKnown RBP1.65□□□□□ -2.15
VPS8-202ENST00000421069 GNG4P50150 75 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 CDK6Q00534 326 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 PSG9Q00887 426 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 COL5A1-AS1Q5SY13 56 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 FKBP1CQ5VVH2 108 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 GLIPR1L1Q6UWM5 242 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 GTF2H5Q6ZYL4 71 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 LINC00301Q8NCQ3 95 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 NUP35Q8NFH5 326 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 PPTC7Q8NI37 304 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 NAA38Q9BRA0 125 aaKnown RBP1.65□□□□□ -2.15
VPS8-202ENST00000421069 NPCDR1Q9BY65 106 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 SCN3BQ9NY72 215 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 SCP2D1Q9UJQ7 156 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 IFT172Q9UG01 1749 aa1.65□□□□□ -2.15
VPS8-202ENST00000421069 UBR2Q8IWV8 1755 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 PLCH1Q4KWH8 1693 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 ADGRB1O14514 1584 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 NRKQ7Z2Y5 1582 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 CCDC88CQ9P219 2028 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 ATG2AQ2TAZ0 1938 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 FMN2Q9NZ56 1722 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 LOC107984640A0A0U1RRK4 108 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 SMIM31A0A1B0GVY4 71 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 ODAMA1E959 279 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 PROSCO94903 275 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 MT-ND4LP03901 98 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 PRB1P04280 392 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 SCTP09683 121 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 AKAIN1P0CW23 69 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 BCL2P10415 239 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 S100A10P60903 97 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 MYL5Q02045 173 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 VMA21Q3ZAQ7 101 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 Q8IYB0 196 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 MMGT1Q8N4V1 131 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.64□□□□□ -2.15
VPS8-202ENST00000421069 OR5A2Q8NGI9 324 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 ZNF563Q8TA94 476 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 NAT14Q8WUY8 206 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 BORCS8Q96FH0 119 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 TEX37Q96LM6 180 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 METTL1Q9UBP6 276 aaKnown RBP1.64□□□□□ -2.15
VPS8-202ENST00000421069 BOKQ9UMX3 212 aaPredicted RBP1.64□□□□□ -2.15
VPS8-202ENST00000421069 SOX21Q9Y651 276 aaPredicted RBP1.64□□□□□ -2.15
VPS8-202ENST00000421069 V9GYS6 101 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 LAMC1P11047 1609 aa1.64□□□□□ -2.15
VPS8-202ENST00000421069 NHSL1Q5SYE7 1610 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms