RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 FOXI2Q6ZQN5 318 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 NUP37Q8NFH4 326 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 NBR2O15453 112 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 THBDP07204 575 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 CKS1BP61024 79 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 SPANXN1Q5VSR9 72 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 GATD1Q8NB37 220 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 NXT2Q9NPJ8 142 aaKnown RBP11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 FABP5P3A8MUU1 101 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 VSTM5A8MXK1 200 aa11.61□□□□□ -0.55
SH3PXD2A-204ENST00000420222 CEACAM3P40198 252 aa11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 SCGB1D4Q6XE38 83 aa11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 TNFRSF14Q92956 283 aa11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 MRPL16Q9NX20 251 aaKnown RBP11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 E7EQL1 145 aa11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 APOMO95445 188 aa11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 ECSCRQ19T08 205 aa11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
SH3PXD2A-204ENST00000420222 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 IGFL2Q6UWQ7 119 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 VKORC1Q9BQB6 163 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 M0R381 172 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 IGLC6P0CF74 106 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 NDPQ00604 133 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 PTH2Q96A98 100 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 H3BVH4 76 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 PSMB2P49721 201 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 DEFB123Q8N688 67 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 ZNF502Q8TBZ5 544 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 GLMPQ8WWB7 406 aa11.59□□□□□ -0.55
SH3PXD2A-204ENST00000420222 E9PLD3 99 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 NDUFS8O00217 210 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 CEACAM4O75871 244 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 OR11H1Q8NG94 326 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 OR11H2Q8NH07 326 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 RAB1BQ9H0U4 201 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
SH3PXD2A-204ENST00000420222 IGKV3-7A0A075B6H7 116 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 F8W1H4 67 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ATP5LO75964 103 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.568e-7■■□□□ 11.6
SH3PXD2A-204ENST00000420222 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 PDE6HQ13956 83 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 LAGE3Q14657 143 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 PLA2G2CQ5R387 149 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 SYT8Q8NBV8 401 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 MGPP08493 103 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 C11orf21Q9P2W6 132 aa11.57□□□□□ -0.56
SH3PXD2A-204ENST00000420222 C8orf31Q8N9H6 132 aa11.56□□□□□ -0.56
SH3PXD2A-204ENST00000420222 TRAV26-1A0A087WT03 109 aa11.56□□□□□ -0.56
SH3PXD2A-204ENST00000420222 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 DEFB1P60022 68 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 Q8N8P6 123 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 LINC01560Q8TB33 94 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 FAM57AQ8TBR7 257 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 RRN3P1Q2M238 152 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 TM2D2Q9BX73 214 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 CELSR1Q9NYQ6 3014 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 LINC01549A6NIU2 74 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 IGHG4P01861 327 aa11.55□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ATRXP46100 2492 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 TNFRSF13BO14836 293 aaPredicted RBP11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ARL3P36405 182 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 DPM3Q9P2X0 92 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 KLHL30-AS1Q8NEE0 82 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 HOXA3O43365 443 aaPredicted RBP11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 C3orf36Q3SXR2 165 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 CTSGP08311 255 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 TMEM78Q5T7P6 136 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ZNF575Q86XF7 245 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 H7C2G1 150 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 CLEC3BP05452 202 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ZFP2Q6ZN57 461 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 KAAG1Q9UBP8 84 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 COL12A1Q99715 3063 aa11.53□□□□□ -0.56
SH3PXD2A-204ENST00000420222 IGLV11-55A0A075B6I3 123 aa11.52□□□□□ -0.56
SH3PXD2A-204ENST00000420222 A0A087WX48 190 aa11.52□□□□□ -0.56
SH3PXD2A-204ENST00000420222 LINC01548A6NM66 108 aa11.52□□□□□ -0.56
SH3PXD2A-204ENST00000420222 S100A4P26447 101 aaKnown RBP11.52□□□□□ -0.56
SH3PXD2A-204ENST00000420222 PRR30Q53SZ7 412 aaPredicted RBP11.52□□□□□ -0.56
SH3PXD2A-204ENST00000420222 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.56
SH3PXD2A-204ENST00000420222 AGPAT4-IT1Q9H0P7 198 aa11.52□□□□□ -0.56
SH3PXD2A-204ENST00000420222 ZFHX3Q15911 3703 aa11.52□□□□□ -0.57
SH3PXD2A-204ENST00000420222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.52□□□□□ -0.57
SH3PXD2A-204ENST00000420222 C15orf32Q32M92 178 aa11.52□□□□□ -0.57
SH3PXD2A-204ENST00000420222 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.57
SH3PXD2A-204ENST00000420222 SHISA9B4DS77 424 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms