RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RRN3P1Q2M238 152 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 C12orf74Q32Q52 190 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 MIR17HGQ75NE6 70 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 OR10J6PQ8NGY7 276 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 FAM167A-AS1Q96KT0 104 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 MRPL32Q9BYC8 188 aaKnown RBP4.93□□□□□ -1.62
HMGN1-205ENST00000419378 PARD6GQ9BYG4 376 aaPredicted RBP4.93□□□□□ -1.62
HMGN1-205ENST00000419378 MED28Q9H204 178 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 TEX48A0A1B0GUV7 120 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 M0R3E3 92 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 IFNA5P01569 189 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 PRM2P04554 102 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 SPART-AS1P0CW21 52 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 CDKN1BP46527 198 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 TCTAP57738 103 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 PDE6HQ13956 83 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 RGS21Q2M5E4 152 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 FFAR4Q5NUL3 377 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 FAM222AQ5U5X8 452 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 RPP25LQ8N5L8 163 aaKnown RBP4.92□□□□□ -1.62
HMGN1-205ENST00000419378 SCGB1C1Q8TD33 95 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 BLNKQ8WV28 456 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 FXYD5Q96DB9 178 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 WFDC1Q9HC57 220 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 FUT9Q9Y231 359 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 YTHDF2Q9Y5A9 579 aaKnown RBP4.92□□□□□ -1.62
HMGN1-205ENST00000419378 TIMM9Q9Y5J7 89 aa4.92□□□□□ -1.62
HMGN1-205ENST00000419378 IGLV5-37A0A075B6J1 123 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 IGHV4-4A0A075B6R2 117 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF705GA8MUZ8 300 aaPredicted RBP4.91□□□□□ -1.62
HMGN1-205ENST00000419378 IGLL5B9A064 214 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 OR7C2O60412 319 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 GIPP09681 153 aaPredicted RBP4.91□□□□□ -1.62
HMGN1-205ENST00000419378 OR10J4P0C629 311 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 CT45A10P0DMU9 189 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 GFI1BQ5VTD9 330 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 LGALS9CQ6DKI2 356 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 TMEM256Q8N2U0 113 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 EXOC3-AS1Q8N2X6 119 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 ASB13Q8WXK3 278 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 MRPL53Q96EL3 112 aaKnown RBP4.91□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF479Q96JC4 524 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 ODF3Q96PU9 254 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 LINC01587Q99440 93 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 NIPSNAP3BQ9BS92 247 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 PAXXQ9BUH6 204 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 OR51M1Q9H341 326 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
HMGN1-205ENST00000419378 DNAH2Q9P225 4427 aa4.9□□□□□ -1.62
HMGN1-205ENST00000419378 PLAC8L1A1L4L8 177 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 EIF3GO75821 320 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGN1-205ENST00000419378 NBEAP1P0C6P0 100 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 AZU1P20160 251 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 TSPOP30536 169 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 LEPP41159 167 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 TAS2R60P59551 318 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 UBE2L3P68036 154 aaKnown RBP4.9□□□□□ -1.63
HMGN1-205ENST00000419378 ERCC8Q13216 396 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 OXA1LQ15070 435 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 KHDC3LQ587J8 217 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 Q5BKY6 102 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 FAM122CQ6P4D5 195 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 PHYHIPLQ96FC7 376 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 AQP10Q96PS8 301 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 C20orf144Q9BQM9 153 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 PRELID1Q9Y255 219 aa4.9□□□□□ -1.63
HMGN1-205ENST00000419378 IGKV2-40A0A087WW87 121 aaPredicted RBP4.89□□□□□ -1.63
HMGN1-205ENST00000419378 LYRM9A8MSI8 78 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 H7BYZ3 331 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 IGKV2D-40P01614 121 aaPredicted RBP4.89□□□□□ -1.63
HMGN1-205ENST00000419378 HTN1P15515 57 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 TAS2R45P59539 299 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 RAB2AP61019 212 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 DAD1P61803 113 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 UBE2V1Q13404 147 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 ZNF266Q14584 549 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 ACOT6Q3I5F7 207 aaPredicted RBP4.89□□□□□ -1.63
HMGN1-205ENST00000419378 OR2T35Q8NGX2 323 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 RNASE8Q8TDE3 154 aaKnown RBP4.89□□□□□ -1.63
HMGN1-205ENST00000419378 TMEM263Q8WUH6 116 aaKnown RBP4.89□□□□□ -1.63
HMGN1-205ENST00000419378 C16orf74Q96GX8 76 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 FAM19A4Q96LR4 140 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 NDUFAF3Q9BU61 184 aa4.89□□□□□ -1.63
HMGN1-205ENST00000419378 FXYD6-FXYD2A0A087WZ82 144 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 TRAV12-3A0A0B4J271 114 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 C7orf71A4D174 169 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 RNF222A6NCQ9 220 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 KLLNB2CW77 178 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 G3V3Q6 166 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 HTN3P15516 51 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 CRISP2P16562 243 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 M6PRP20645 277 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 ATP6V0CP27449 155 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 RANP62826 216 aaKnown RBP4.88□□□□□ -1.63
HMGN1-205ENST00000419378 BTN1A1Q13410 526 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 TMEM78Q5T7P6 136 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 ZNF493Q6ZR52 646 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 LYPD1Q8N2G4 141 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 HSD17B11Q8NBQ5 300 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms