RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MAP1LC3CQ9BXW4 147 aa11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 TMSB15BA0A087X1C1 80 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 LGALS9O00182 355 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 SMAD7O15105 426 aaKnown RBP11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 SNAI2O43623 268 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ERCC8Q13216 396 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 SPATA12Q7Z6I5 190 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 PRSS3P2Q8NHM4 247 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ODF3Q96PU9 254 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 CREBBPQ92793 2442 aa11.07□□□□□ -0.64
HLA-DPA1-242ENST00000419277 IGHV3OR16-13A0A075B7E8 117 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 IGHV3-74A0A0B4J1X5 117 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 A1L4Q6 167 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 UQCR10Q9UDW1 63 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 PAM16Q9Y3D7 125 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 D6R8Y8 96 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 SYS1-DBNDD2H3BUS1 97 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 LGALS1P09382 135 aaKnown RBP11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 CKS2P33552 79 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 Q8N2B8 174 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
HLA-DPA1-242ENST00000419277 TRAV9-2A0A087WT02 112 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 TMEM213A2RRL7 107 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 TCF21O43680 179 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 CD33P20138 364 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 FAM19A4Q96LR4 140 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 NXT2Q9NPJ8 142 aaKnown RBP11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 CSPG4Q6UVK1 2322 aa11.05□□□□□ -0.64
HLA-DPA1-242ENST00000419277 IGKV3D-20A0A0C4DH25 116 aa11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 LINC01546A6NGU7 62 aa11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 M0R143 59 aa11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 Q6ZS46 218 aa11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 OR8A1Q8NGG7 326 aa11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 MAP1LC3AQ9H492 121 aa11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ZNF705AQ6ZN79 300 aaPredicted RBP11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ZNF575Q86XF7 245 aa11.04□□□□□ -0.64
HLA-DPA1-242ENST00000419277 USP9YO00507 2555 aaPredicted RBP11.03□□□□□ -0.64
HLA-DPA1-242ENST00000419277 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
HLA-DPA1-242ENST00000419277 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
HLA-DPA1-242ENST00000419277 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
HLA-DPA1-242ENST00000419277 NAV2Q8IVL1 2488 aa11.03□□□□□ -0.64
HLA-DPA1-242ENST00000419277 PTPN13Q12923 2485 aa11.02□□□□□ -0.64
HLA-DPA1-242ENST00000419277 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 HBDP02042 147 aa11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 SNRPD3P62318 126 aaKnown RBP11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 WFDC12Q8WWY7 111 aa11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 C20orf173Q96LM9 149 aa11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 Q96MF0 132 aa11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 SIGLEC8Q9NYZ4 499 aa11.02□□□□□ -0.65
HLA-DPA1-242ENST00000419277 PRSS47A8MTI9 375 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 M0QZ24 198 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 IGLC3P0DOY3 106 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 TM4SF20Q53R12 229 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 DCANP1Q8TF63 244 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 MRAP2Q96G30 205 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 OR4C46A6NHA9 309 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 K7EMI3 77 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 CSN3P07498 182 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 DPF1Q92782 380 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 ZNF747Q9BV97 191 aa11.01□□□□□ -0.65
HLA-DPA1-242ENST00000419277 EPG5Q9HCE0 2579 aa11□□□□□ -0.65
HLA-DPA1-242ENST00000419277 PPP1R17O96001 155 aa11□□□□□ -0.65
HLA-DPA1-242ENST00000419277 ASIPP42127 132 aa11□□□□□ -0.65
HLA-DPA1-242ENST00000419277 SPANXN1Q5VSR9 72 aa11□□□□□ -0.65
HLA-DPA1-242ENST00000419277 LINC01545Q5VT33 79 aa11□□□□□ -0.65
HLA-DPA1-242ENST00000419277 RNF185Q96GF1 192 aa11□□□□□ -0.65
HLA-DPA1-242ENST00000419277 MS4A6AQ9H2W1 248 aa11□□□□□ -0.65
HLA-DPA1-242ENST00000419277 TRAV2A0A0B4J234 112 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 KLLNB2CW77 178 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 IFI27P40305 119 aaPredicted RBP10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 LEPP41159 167 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 SCGB2A2Q13296 93 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 TDRG1Q3Y452 100 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 CELSR2Q9HCU4 2923 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 CRYBG3Q68DQ2 2970 aa10.99□□□□□ -0.65
HLA-DPA1-242ENST00000419277 KRTAP10-9P60411 292 aa10.98□□□□□ -0.65
HLA-DPA1-242ENST00000419277 KRTAP1-3Q8IUG1 177 aa10.98□□□□□ -0.65
HLA-DPA1-242ENST00000419277 UTP20O75691 2785 aaKnown RBP10.98□□□□□ -0.65
HLA-DPA1-242ENST00000419277 NPYP01303 97 aa10.98□□□□□ -0.65
HLA-DPA1-242ENST00000419277 RPLP1P05386 114 aaKnown RBP10.98□□□□□ -0.65
HLA-DPA1-242ENST00000419277 SCRT2Q9NQ03 307 aa10.98□□□□□ -0.65
HLA-DPA1-242ENST00000419277 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
HLA-DPA1-242ENST00000419277 DUSP14O95147 198 aaKnown RBP10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 NXPH4O95158 308 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms