RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GTSCR1Q86UQ5 136 aa9.17□□□□□ -0.94
LIMK1-202ENST00000418310 Q8N6K4 173 aa9.17□□□□□ -0.94
LIMK1-202ENST00000418310 ZNF502Q8TBZ5 544 aa9.17□□□□□ -0.94
LIMK1-202ENST00000418310 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
LIMK1-202ENST00000418310 SPOCK3Q9BQ16 436 aa9.17□□□□□ -0.94
LIMK1-202ENST00000418310 VPS25Q9BRG1 176 aa9.17□□□□□ -0.94
LIMK1-202ENST00000418310 ITPR1Q14643 2758 aa9.17□□□□□ -0.94
LIMK1-202ENST00000418310 IGKV3D-20A0A0C4DH25 116 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 FBLL1A6NHQ2 334 aaKnown RBP9.16□□□□□ -0.94
LIMK1-202ENST00000418310 H3BVH4 76 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 SRD5A1P18405 259 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 TMEM78Q5T7P6 136 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 ZNF575Q86XF7 245 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 TMEM158Q8WZ71 300 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 TRBV12-3P01733 135 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 IGLC6P0CF74 106 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 RBX1P62877 108 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 SPANXN1Q5VSR9 72 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 DTX2Q86UW9 622 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 SIRPDQ9H106 197 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 CSMD2Q7Z408 3487 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 A1L4Q6 167 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 M0R381 172 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 GCSHP23434 173 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 FBXL19-AS1Q494R0 122 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 TMEM160Q9NX00 188 aa9.16□□□□□ -0.94
LIMK1-202ENST00000418310 ZFYVE26Q68DK2 2539 aa9.15□□□□□ -0.94
LIMK1-202ENST00000418310 FLNCQ14315 2725 aa9.15□□□□□ -0.94
LIMK1-202ENST00000418310 MYO18BQ8IUG5 2567 aa9.15□□□□□ -0.94
LIMK1-202ENST00000418310 FGF6P10767 208 aa9.15□□□□□ -0.94
LIMK1-202ENST00000418310 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.94
LIMK1-202ENST00000418310 CLPSL1A2RUU4 121 aa9.15□□□□□ -0.95
LIMK1-202ENST00000418310 F6UB75 175 aa9.15□□□□□ -0.95
LIMK1-202ENST00000418310 EFNA4P52798 201 aa9.15□□□□□ -0.95
LIMK1-202ENST00000418310 FAM110DQ8TAY7 271 aaPredicted RBP9.15□□□□□ -0.95
LIMK1-202ENST00000418310 METTL26Q96S19 204 aa9.15□□□□□ -0.95
LIMK1-202ENST00000418310 ACACBO00763 2458 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 ABCA2Q9BZC7 2435 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 SMAD7O15105 426 aaKnown RBP9.14□□□□□ -0.95
LIMK1-202ENST00000418310 CD5LO43866 347 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 KIR3DS1Q14943 382 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 LGALS9BQ3B8N2 356 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 JMJD8Q96S16 334 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 CST9LQ9H4G1 147 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 TRAV40A0A0B4J280 105 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 RPS20P60866 119 aaKnown RBP9.14□□□□□ -0.95
LIMK1-202ENST00000418310 MINOS1Q5TGZ0 78 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 MINOS1-NBL1R4GNA1 71 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 U3KQK5 164 aa9.14□□□□□ -0.95
LIMK1-202ENST00000418310 C19orf84I3L1E1 186 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 K7ERJ3 54 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 PRR9Q5T870 116 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
LIMK1-202ENST00000418310 PKD1L2Q7Z442 2459 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 TRAV8-2A0A0B4J237 113 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 GAGE12BA1L429 117 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 SAP30O75446 220 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 UNQ9165/PRO28630Q6UXU0 137 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 GATD1Q8NB37 220 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 FCER1GP30273 86 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 EEF1AKMT3Q96AZ1 226 aa9.13□□□□□ -0.95
LIMK1-202ENST00000418310 NPFFO15130 113 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 UBE2E1P51965 193 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 ZC2HC1BQ5TFG8 222 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 ZNF48Q96MX3 618 aaPredicted RBP9.12□□□□□ -0.95
LIMK1-202ENST00000418310 CENPVL3A0A0U1RRI6 287 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 S100A4P26447 101 aaKnown RBP9.12□□□□□ -0.95
LIMK1-202ENST00000418310 ATP5G2Q06055 141 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 MGPP08493 103 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 AJUBAQ96IF1 538 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 ZANQ9Y493 2812 aa9.12□□□□□ -0.95
LIMK1-202ENST00000418310 TMEM8BA6NDV4 472 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 EBI3Q14213 229 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 SMIM15Q7Z3B0 74 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 BOD1L2Q8IYS8 172 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 C20orf173Q96LM9 149 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 TLN2Q9Y4G6 2542 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 SMIM17P0DL12 118 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 PAX8Q06710 450 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 NEGR1Q7Z3B1 354 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 OR2K2Q8NGT1 345 aa9.11□□□□□ -0.95
LIMK1-202ENST00000418310 USP9XQ93008 2570 aaPredicted RBP9.11□□□□□ -0.95
LIMK1-202ENST00000418310 LMO4P61968 165 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 ODF1Q14990 250 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 OCIAD2Q56VL3 154 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 MRPL35Q9NZE8 188 aaKnown RBP9.1□□□□□ -0.95
LIMK1-202ENST00000418310 CFAP46Q8IYW2 2715 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 PF4V1P10720 104 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 EDN2P20800 178 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 ARL3P36405 182 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 FXYD2P54710 66 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 TRAV41A0A0B4J266 112 aa9.1□□□□□ -0.95
LIMK1-202ENST00000418310 A0A0G2JLM5 398 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms