RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 E5RGE8 158 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 EREGO14944 169 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 CSN1S1P47710 185 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 CRYBA4P53673 196 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 ERVFC1-1P60608 527 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 FXYD5Q96DB9 178 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 PHYHIPLQ96FC7 376 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 PTTG2Q9NZH5 202 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 OR7C2O60412 319 aa9.86□□□□□ -0.83
PAF1-202ENST00000416728 PRAF2O60831 178 aa9.86□□□□□ -0.83
PAF1-202ENST00000416728 FHL2Q14192 279 aa9.86□□□□□ -0.83
PAF1-202ENST00000416728 LRRC37A5PQ49AS3 106 aa9.86□□□□□ -0.83
PAF1-202ENST00000416728 LYPD5Q6UWN5 251 aa9.86□□□□□ -0.83
PAF1-202ENST00000416728 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
PAF1-202ENST00000416728 WDR61Q9GZS3 305 aaKnown RBP9.86□□□□□ -0.83
PAF1-202ENST00000416728 TRAV9-2A0A087WT02 112 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 TRGV4A0A0C4DH28 118 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 RBAKDNA6NC62 111 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 C17orf112F2Z3M2 114 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 SIX6O95475 246 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 RANP62826 216 aaKnown RBP9.85□□□□□ -0.83
PAF1-202ENST00000416728 ZNF266Q14584 549 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 MUC21Q5SSG8 566 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 NFE4Q86UQ8 179 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 OR5AC2Q9NZP5 309 aa9.85□□□□□ -0.83
PAF1-202ENST00000416728 UBE2L3P68036 154 aaKnown RBP9.84□□□□□ -0.83
PAF1-202ENST00000416728 ASAH1Q13510 395 aa9.84□□□□□ -0.83
PAF1-202ENST00000416728 CDPF1Q6NVV7 123 aa9.84□□□□□ -0.83
PAF1-202ENST00000416728 LYPD1Q8N2G4 141 aa9.84□□□□□ -0.83
PAF1-202ENST00000416728 NMES1Q9C002 83 aa9.84□□□□□ -0.83
PAF1-202ENST00000416728 MDFICQ9P1T7 246 aa9.84□□□□□ -0.83
PAF1-202ENST00000416728 TNFRSF18Q9Y5U5 241 aa9.84□□□□□ -0.83
PAF1-202ENST00000416728 H0YIZ8 118 aa9.83□□□□□ -0.84
PAF1-202ENST00000416728 ATP6V1G1O75348 118 aa9.83□□□□□ -0.84
PAF1-202ENST00000416728 SFTA3P0C7M3 94 aa9.83□□□□□ -0.84
PAF1-202ENST00000416728 SRIP30626 198 aa9.83□□□□□ -0.84
PAF1-202ENST00000416728 CYCSP99999 105 aaKnown RBP9.83□□□□□ -0.84
PAF1-202ENST00000416728 ENKURQ8TC29 256 aa9.83□□□□□ -0.84
PAF1-202ENST00000416728 PCNPQ8WW12 178 aaKnown RBP9.83□□□□□ -0.84
PAF1-202ENST00000416728 LY96Q9Y6Y9 160 aa9.83□□□□□ -0.84
PAF1-202ENST00000416728 TRGV11A0A075B6L2 103 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 K7EQD1 137 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 FUSP35637 526 aaKnown RBP eCLIP9.82□□□□□ -0.84
PAF1-202ENST00000416728 TMEM183BQ1AE95 376 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 Q6AWC8 147 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 FAM159AQ6UWV7 190 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 IQCF2Q8IXL9 164 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 TMEM183AQ8IXX5 376 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 OR10G4Q8NGN3 311 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 ZNF479Q96JC4 524 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 ATP5SQ99766 215 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 SPXQ9BT56 116 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 LENEPQ9Y5L5 61 aa9.82□□□□□ -0.84
PAF1-202ENST00000416728 A0A1B0GVG6 124 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 K7EP13 123 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 ORM1P02763 201 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 GYPEP15421 78 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 TAS2R45P59539 299 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 KHDC3LQ587J8 217 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 FFAR4Q5NUL3 377 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 LINC00299Q6ZSB3 139 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 S100ZQ8WXG8 99 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 RASL10AQ92737 203 aa9.81□□□□□ -0.84
PAF1-202ENST00000416728 A0A087WTM6 91 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 DIRC3C9JPN6 131 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 EVI2AP22794 236 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 HYLS1Q96M11 299 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 TXNDC17Q9BRA2 123 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 MSRB1Q9NZV6 116 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 NAGKQ9UJ70 344 aa9.8□□□□□ -0.84
PAF1-202ENST00000416728 C9JCJ5 164 aa9.79□□□□□ -0.84
PAF1-202ENST00000416728 IFNA5P01569 189 aa9.79□□□□□ -0.84
PAF1-202ENST00000416728 CMTM2Q8TAZ6 248 aa9.79□□□□□ -0.84
PAF1-202ENST00000416728 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
PAF1-202ENST00000416728 PPP1R1CQ8WVI7 109 aa9.79□□□□□ -0.84
PAF1-202ENST00000416728 TMED6Q8WW62 240 aa9.79□□□□□ -0.84
PAF1-202ENST00000416728 TRAV4A0A0B4J268 109 aa9.78□□□□□ -0.84
PAF1-202ENST00000416728 H2BFSP57053 126 aa9.78□□□□□ -0.84
PAF1-202ENST00000416728 TDRG1Q3Y452 100 aa9.78□□□□□ -0.84
PAF1-202ENST00000416728 OR4C5Q8NGB2 326 aa9.78□□□□□ -0.84
PAF1-202ENST00000416728 OTORQ9NRC9 128 aa9.78□□□□□ -0.84
PAF1-202ENST00000416728 RPH3ALQ9UNE2 315 aa9.78□□□□□ -0.84
PAF1-202ENST00000416728 HSPB11Q9Y547 144 aa9.78□□□□□ -0.84
PAF1-202ENST00000416728 INMT-MINDY4F8WBC2 141 aa9.77□□□□□ -0.84
PAF1-202ENST00000416728 PFDN1O60925 122 aa9.77□□□□□ -0.84
PAF1-202ENST00000416728 UPK1BO75841 260 aa9.77□□□□□ -0.84
PAF1-202ENST00000416728 PET100P0DJ07 73 aa9.77□□□□□ -0.84
PAF1-202ENST00000416728 XGP55808 180 aa9.77□□□□□ -0.84
PAF1-202ENST00000416728 FAM74A1Q5RGS3 127 aa9.77□□□□□ -0.84
PAF1-202ENST00000416728 PGPA6NDG6 321 aa9.76□□□□□ -0.85
PAF1-202ENST00000416728 M0R2P5 195 aa9.76□□□□□ -0.85
PAF1-202ENST00000416728 EIF3GO75821 320 aaKnown RBP eCLIP9.76□□□□□ -0.85
PAF1-202ENST00000416728 CRYGDP07320 174 aa9.76□□□□□ -0.85
PAF1-202ENST00000416728 C10orf126Q8N4M7 172 aa9.76□□□□□ -0.85
PAF1-202ENST00000416728 SMIM3Q9BZL3 60 aa9.76□□□□□ -0.85
PAF1-202ENST00000416728 MBD2Q9UBB5 411 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms