RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ATP5LO75964 103 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 SRSF1Q07955 248 aaKnown RBP eCLIP11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 IGFL4Q6B9Z1 124 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 Q8NA96 180 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 MYOZ3Q8TDC0 251 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 OR11H12B2RN74 326 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 CFAP126Q5VTH2 177 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 MORN3Q6PF18 240 aaPredicted RBP11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 TMEM14CQ9P0S9 112 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 PKD1L2Q7Z442 2459 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 ITPR1Q14643 2758 aa11.51□□□□□ -0.57
NCKIPSD-204ENST00000416649 EFNA4P52798 201 aa11.5□□□□□ -0.57
NCKIPSD-204ENST00000416649 SHISA9B4DS77 424 aa11.5□□□□□ -0.57
NCKIPSD-204ENST00000416649 GAGE5Q13069 117 aa11.5□□□□□ -0.57
NCKIPSD-204ENST00000416649 GAGE6Q13070 117 aa11.5□□□□□ -0.57
NCKIPSD-204ENST00000416649 SHISA2Q6UWI4 295 aa11.5□□□□□ -0.57
NCKIPSD-204ENST00000416649 CNIH1O95406 144 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 KIR2DL4Q99706 377 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 NXT2Q9NPJ8 142 aaKnown RBP11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 SLC25A15Q9Y619 301 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 TAL2Q16559 108 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 ZFAND6Q6FIF0 208 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 TEX29Q8N6K0 151 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 A0A0G2JNJ9 132 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 ZNF80P51504 273 aaPredicted RBP11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 RNF185Q96GF1 192 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 Q9UFV3 132 aa11.49□□□□□ -0.57
NCKIPSD-204ENST00000416649 HIVEP3Q5T1R4 2406 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 SCGB1D4Q6XE38 83 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 TRAV26-2A0A0B4J265 109 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 FAM57AQ8TBR7 257 aa11.48□□□□□ -0.57
NCKIPSD-204ENST00000416649 TRBV20-1A0A075B6N2 111 aa11.47□□□□□ -0.57
NCKIPSD-204ENST00000416649 TRBV6-1A0A0K0K1D8 114 aa11.47□□□□□ -0.57
NCKIPSD-204ENST00000416649 PLGLAQ15195 96 aa11.47□□□□□ -0.57
NCKIPSD-204ENST00000416649 TMEM200BQ69YZ2 307 aa11.47□□□□□ -0.57
NCKIPSD-204ENST00000416649 CARD19Q96LW7 228 aa11.47□□□□□ -0.57
NCKIPSD-204ENST00000416649 VSTM5A8MXK1 200 aa11.47□□□□□ -0.57
NCKIPSD-204ENST00000416649 HERV-K104P63124 156 aa11.47□□□□□ -0.57
NCKIPSD-204ENST00000416649 PPDPFLQ8WWR9 84 aa11.46□□□□□ -0.57
NCKIPSD-204ENST00000416649 MRGPRG-AS1Q2M3A8 158 aa11.46□□□□□ -0.57
NCKIPSD-204ENST00000416649 SMIM20Q8N5G0 67 aa11.46□□□□□ -0.57
NCKIPSD-204ENST00000416649 CTSZQ9UBR2 303 aa11.46□□□□□ -0.57
NCKIPSD-204ENST00000416649 SPG11Q96JI7 2443 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 IGHV3OR16-8A0A075B7F1 116 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 K7ENP7 123 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 IGHV1-46P01743 117 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 PRTN3P24158 256 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 RNF125Q96EQ8 232 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 PRR25Q96S07 402 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 FBXL15Q9H469 300 aa11.46□□□□□ -0.58
NCKIPSD-204ENST00000416649 ATP6V0E2Q8NHE4 81 aa11.45□□□□□ -0.58
NCKIPSD-204ENST00000416649 VKORC1Q9BQB6 163 aa11.45□□□□□ -0.58
NCKIPSD-204ENST00000416649 H3BRN7 92 aa11.45□□□□□ -0.58
NCKIPSD-204ENST00000416649 DTX2Q86UW9 622 aa11.45□□□□□ -0.58
NCKIPSD-204ENST00000416649 LINC00574Q9H8X3 128 aa11.45□□□□□ -0.58
NCKIPSD-204ENST00000416649 SCGB1C2P0DMR2 95 aa11.44□□□□□ -0.58
NCKIPSD-204ENST00000416649 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
NCKIPSD-204ENST00000416649 TEN1Q86WV5 123 aa11.44□□□□□ -0.58
NCKIPSD-204ENST00000416649 CCL17Q92583 94 aa11.44□□□□□ -0.58
NCKIPSD-204ENST00000416649 A0A087WX48 190 aa11.44□□□□□ -0.58
NCKIPSD-204ENST00000416649 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
NCKIPSD-204ENST00000416649 TMEM78Q5T7P6 136 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 Q8N8P6 123 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 ZNF815PA8K554 130 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 TRGV3P03979 118 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 GLRXP35754 106 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 LAGE3Q14657 143 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 ZNF491Q8N8L2 437 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 SIGLEC9Q9Y336 463 aa11.43□□□□□ -0.58
NCKIPSD-204ENST00000416649 LGALS1P09382 135 aaKnown RBP11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 IGLC6P0CF74 106 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 PLNP26678 52 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 TRBV7-9A0A0J9YWB2 115 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 A8MWV9 139 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 MSRB2Q9Y3D2 182 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 A6NJY4 79 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 I3L2K1 104 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 ANKRD29Q8N6D5 301 aa11.42□□□□□ -0.58
NCKIPSD-204ENST00000416649 IGHV3-35A0A0C4DH35 117 aa11.41□□□□□ -0.58
NCKIPSD-204ENST00000416649 TRAV8-2A0A0B4J237 113 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms