RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TMEM238C9JI98 176 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 ATP5LO75964 103 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 LEPP41159 167 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 ERCC8Q13216 396 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 Q8N8P6 123 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 SIRPDQ9H106 197 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 PRAC2D3DTV9 90 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 HLA-DRB4P13762 266 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 C15orf32Q32M92 178 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 Q6ZQT7 251 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 ATP6V0BQ99437 205 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 SPCS1Q9Y6A9 102 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 HLA-DRB4X5D2U9 266 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 AGRNO00468 2067 aa7.55□□□□□ -1.2
CD44-206ENST00000415148 CLEC3BP05452 202 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 UBE2E1P51965 193 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 ODF1Q14990 250 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 DTX2Q86UW9 622 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 IGHV4-4A0A075B6R2 117 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 TRBV7-1A0A0A6YYK4 115 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 GCSHP23434 173 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 GTSCR1Q86UQ5 136 aa7.54□□□□□ -1.2
CD44-206ENST00000415148 CELSR1Q9NYQ6 3014 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 IGLV2-18A0A075B6J9 118 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 IGKV3D-20A0A0C4DH25 116 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 CLPSL1A2RUU4 121 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 IGKCP01834 107 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 C9orf47Q6ZRZ4 202 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 IL17RELQ6ZVW7 336 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 OR5A1Q8NGJ0 315 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 EEF1AKMT3Q96AZ1 226 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 AGPAT4-IT1Q9H0P7 198 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 VPS13CQ709C8 3753 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 PRSS1P07477 247 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 ZFP36P26651 326 aaKnown RBP7.53□□□□□ -1.2
CD44-206ENST00000415148 ADORA2A-AS1P86434 159 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 TMEM78Q5T7P6 136 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 RNF182Q8N6D2 247 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 MAPKAPK5-AS1Q8N8E1 139 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 U3KQE9 123 aa7.53□□□□□ -1.2
CD44-206ENST00000415148 TEX48A0A1B0GUV7 120 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 TRGV3P03979 118 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 SMIM13P0DJ93 91 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 SRSF1Q07955 248 aaKnown RBP eCLIP7.52□□□□□ -1.21
CD44-206ENST00000415148 PHLDA1Q8WV24 401 aaPredicted RBP7.52□□□□□ -1.21
CD44-206ENST00000415148 METTL26Q96S19 204 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 LENEPQ9Y5L5 61 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 IGHV3-66A0A0C4DH42 116 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 ATP6V0E1O15342 81 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 DPM2O94777 84 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 FOXC1Q12948 553 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 SAMD5Q5TGI4 173 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 MYOZ3Q8TDC0 251 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 TMEM158Q8WZ71 300 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 AJUBAQ96IF1 538 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
CD44-206ENST00000415148 TRAV8-2A0A0B4J237 113 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 TRAV26-2A0A0B4J265 109 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 IGHV7-4-1A0A0J9YVY3 117 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 LAGE3Q14657 143 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 CLEC19AQ6UXS0 136 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 FOXC2Q99958 501 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 CHAC1Q9BUX1 264 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 PIEZO1Q92508 2521 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 TLN1Q9Y490 2541 aaKnown RBP7.51□□□□□ -1.21
CD44-206ENST00000415148 TRBV25-1A0A075B6N4 114 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 IGHV3OR16-13A0A075B7E8 117 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 IGHV3-74A0A0B4J1X5 117 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 SPRY2O43597 315 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 SMIM17P0DL12 118 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 KLRB1Q12918 225 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 CDSNQ15517 529 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 ECSCRQ19T08 205 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 MTURNQ8N3F0 131 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 NRACQ8N912 160 aa7.51□□□□□ -1.21
CD44-206ENST00000415148 RPL24P83731 157 aaKnown RBP7.5□□□□□ -1.21
CD44-206ENST00000415148 TAL2Q16559 108 aa7.5□□□□□ -1.21
CD44-206ENST00000415148 C8orf86Q6ZUL3 223 aa7.5□□□□□ -1.21
CD44-206ENST00000415148 MRAP2Q96G30 205 aa7.5□□□□□ -1.21
CD44-206ENST00000415148 NHP2Q9NX24 153 aaKnown RBP7.5□□□□□ -1.21
CD44-206ENST00000415148 NBASA2RRP1 2371 aa7.5□□□□□ -1.21
CD44-206ENST00000415148 TRAV40A0A0B4J280 105 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 CENPVL3A0A0U1RRI6 287 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 TMEM8BA6NDV4 472 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 FABP2P12104 132 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 UCNP55089 124 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 TM2D2Q9BX73 214 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 ATP5G2Q06055 141 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 WFDC2Q14508 124 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 ZC2HC1BQ5TFG8 222 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 TMEM160Q9NX00 188 aa7.49□□□□□ -1.21
CD44-206ENST00000415148 A0A087WX48 190 aa7.48□□□□□ -1.21
CD44-206ENST00000415148 IGHV3-49A0A0A0MS15 119 aa7.48□□□□□ -1.21
CD44-206ENST00000415148 TRAV12-1A0A0B4J245 112 aa7.48□□□□□ -1.21
CD44-206ENST00000415148 FAM223BA6NKX1 122 aa7.48□□□□□ -1.21
CD44-206ENST00000415148 SAA4P35542 130 aa7.48□□□□□ -1.21
CD44-206ENST00000415148 EFNA4P52798 201 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms