RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CDX2Q99626 313 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 FGF23Q9GZV9 251 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 IFI27L2Q9H2X8 130 aa1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 MAP1LC3AQ9H492 121 aa1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 PRTFDC1Q9NRG1 225 aa1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 TMEM167BQ9NRX6 74 aa1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 SPANXCQ9NY87 97 aa1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 ZNF492Q9P255 531 aa1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 LRRK1Q38SD2 2015 aa1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 TNRC18O15417 2968 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P2-201ENST00000411913 ATG2BQ96BY7 2078 aa1.71□□□□□ -2.13
HMGB3P2-201ENST00000411913 SCN3AQ9NY46 2000 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ALPK2Q86TB3 2170 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 THADAQ6YHU6 1953 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 TRBV7-3A0A075B6L6 115 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 TRBV25-1A0A075B6N4 114 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 IGKV2D-26A0A0A0MRZ7 120 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 TRBV6-1A0A0K0K1D8 114 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 TEX50A0A1B0GTY4 177 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 EPOPA6NHQ4 379 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 C17orf98A8MV24 154 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 HIGD1CA8MV81 97 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 A8MWL6 223 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 C10orf142B7Z368 130 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 K7ERJ3 54 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 M0R135 149 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 TIMM8AO60220 97 aaPredicted RBP1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 SS18L1O75177 396 aaPredicted RBP1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 MOSP00540 346 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 LTAP01374 205 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 IGHV3-48P01763 117 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 FREM3P0C091 2139 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 IFITM1P13164 125 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 COL8A2P25067 703 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 G6PCP35575 357 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 NMUP48645 174 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 UBE2D1P51668 147 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 EDDM3BP56851 147 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 FGF12P61328 243 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 RPL30P62888 115 aaKnown RBP1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 TNFAIP6P98066 277 aaPredicted RBP1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ZNF77Q15935 545 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 FAM27BQ5VT28 67 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 TEX36Q5VZQ5 186 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 MIC13Q5XKP0 118 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 C11orf71Q6IPW1 123 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 H2BFWTQ7Z2G1 175 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 DRAM1Q8N682 238 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ZNRF2Q8NHG8 242 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 BORCS8Q96FH0 119 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ZNF799Q96GE5 643 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 FAM167A-AS1Q96KT0 104 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 PGLYRP4Q96LB8 373 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ZNF488Q96MN9 340 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ODF3Q96PU9 254 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 CHAC1Q9BUX1 264 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 EMC6Q9BV81 110 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 SPANXDQ9BXN6 97 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ZNF442Q9H7R0 627 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 ZNF355PQ9NSJ1 428 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 HRASLS2Q9NWW9 162 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 CCL26Q9Y258 94 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 CACNA1CQ13936 2221 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 KMT2EQ8IZD2 1858 aa1.71□□□□□ -2.14
HMGB3P2-201ENST00000411913 SPTBP11277 2137 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 TRAV5A0A0B4J249 113 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 TRAV4A0A0B4J268 109 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 TRBV7-7A0A0K0K1E9 115 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 KRTAP4-16G5E9R7 235 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 M0R2P5 195 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 ATP5LO75964 103 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 CRYGDP07320 174 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 MGST1P10620 155 aaKnown RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 FKBP2P26885 142 aaKnown RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 CSN1S1P47710 185 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 ZNF138P52744 262 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 TCTAP57738 103 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 SEC61GP60059 68 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 NDPQ00604 133 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 LOXL1Q08397 574 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 EBI3Q14213 229 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 CST6Q15828 149 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 NNATQ16517 81 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 NSUN5P1Q3KNT7 163 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 ALKBH6Q3KRA9 238 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 C6orf226Q5I0X4 101 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 DEFB121Q5J5C9 76 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 MEIG1Q5JSS6 88 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 C9orf129Q5T035 196 aaKnown RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 AMTNQ6UX39 209 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 LINC00322Q6ZN03 302 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 SLC25A48Q6ZT89 311 aaKnown RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 MIR17HGQ75NE6 70 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 C14orf178Q8N769 122 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 OR11H6Q8NGC7 330 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 OR10J6PQ8NGY7 276 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 PHF3Q92576 2039 aaKnown RBP1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 SPTSSAQ969W0 71 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 TIMD4Q96H15 378 aa1.7□□□□□ -2.14
HMGB3P2-201ENST00000411913 TMEM101Q96IK0 257 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms