RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 P0C879 139 aa8.78□□□□□ -1
SNX13-202ENST00000409604 ZNF415Q09FC8 603 aa8.78□□□□□ -1
SNX13-202ENST00000409604 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
SNX13-202ENST00000409604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.78□□□□□ -1
SNX13-202ENST00000409604 THAP8Q8NA92 274 aa8.78□□□□□ -1
SNX13-202ENST00000409604 PHLDA1Q8WV24 401 aaPredicted RBP8.78□□□□□ -1
SNX13-202ENST00000409604 PRELID3AQ96N28 172 aa8.78□□□□□ -1
SNX13-202ENST00000409604 C12orf57Q99622 126 aa8.78□□□□□ -1
SNX13-202ENST00000409604 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
SNX13-202ENST00000409604 MRPL27Q9P0M9 148 aaKnown RBP8.78□□□□□ -1
SNX13-202ENST00000409604 PAM16Q9Y3D7 125 aa8.78□□□□□ -1
SNX13-202ENST00000409604 AGRNO00468 2067 aa8.78□□□□□ -1
SNX13-202ENST00000409604 TMEM213A2RRL7 107 aa8.78□□□□□ -1
SNX13-202ENST00000409604 BUB3O43684 328 aa8.78□□□□□ -1
SNX13-202ENST00000409604 Q86TA4 180 aa8.78□□□□□ -1
SNX13-202ENST00000409604 AP1S3Q96PC3 154 aa8.78□□□□□ -1
SNX13-202ENST00000409604 CARHSP1Q9Y2V2 147 aaKnown RBP8.78□□□□□ -1
SNX13-202ENST00000409604 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
SNX13-202ENST00000409604 HLA-DQA1P01909 254 aa8.78□□□□□ -1
SNX13-202ENST00000409604 ZNF876PQ49A33 203 aa8.78□□□□□ -1
SNX13-202ENST00000409604 PACRGQ96M98 296 aaPredicted RBP8.78□□□□□ -1
SNX13-202ENST00000409604 C2orf70A6NJV1 201 aa8.78□□□□□ -1
SNX13-202ENST00000409604 TMEM190Q8WZ59 177 aa8.78□□□□□ -1
SNX13-202ENST00000409604 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 GNRH2O43555 120 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 A0A1B0GUS0 222 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 CRYGCP07315 174 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 RPS20P60866 119 aaKnown RBP8.77□□□□□ -1.01
SNX13-202ENST00000409604 PRR25Q96S07 402 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 GAGE12BA1L429 117 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 TSTD3H0UI37 97 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 GAGE7O76087 117 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 GAGE12FP0CL80 117 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 GAGE12GP0CL81 117 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 GAGE12IP0CL82 117 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 AMN1Q8IY45 258 aa8.77□□□□□ -1.01
SNX13-202ENST00000409604 MCRIP2Q9BUT9 160 aaKnown RBP8.76□□□□□ -1.01
SNX13-202ENST00000409604 VWC2LB2RUY7 222 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 FNDC10F2Z333 226 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 GP9P14770 177 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 ANXA2RQ3ZCQ2 193 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 UBE2L6O14933 153 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 ELOBQ15370 118 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 ZC2HC1AQ96GY0 325 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 MAP1LC3AQ9H492 121 aa8.76□□□□□ -1.01
SNX13-202ENST00000409604 G0S2P27469 103 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 MYOZ3Q8TDC0 251 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 WFDC10AQ9H1F0 79 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 LEPP41159 167 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 SNAI2O43623 268 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 LINC00482Q8N8I6 264 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 TCEAL7Q9BRU2 100 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 DCHS2Q6V1P9 2916 aa8.75□□□□□ -1.01
SNX13-202ENST00000409604 OR4C5Q8NGB2 326 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 LEPROTL1O95214 131 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 TSKUQ8WUA8 353 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 FAM167A-AS1Q96KT0 104 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 KIR2DL4Q99706 377 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 GSN-AS1Q9NRJ2 163 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 AP5S1Q9NUS5 200 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 DMRT1Q9Y5R6 373 aa8.74□□□□□ -1.01
SNX13-202ENST00000409604 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 IZUMO1RA6ND01 250 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 PRM2P04554 102 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 NMUP48645 174 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 DEFB125Q8N687 156 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 ZNF702PQ9H963 129 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 D6R8Y8 96 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 INSP01308 110 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 IGHG4P01861 327 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 CRYGBP07316 175 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 IGLL1P15814 213 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 VAMP8Q9BV40 100 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 MRPL16Q9NX20 251 aaKnown RBP8.73□□□□□ -1.01
SNX13-202ENST00000409604 IGF1P05019 195 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 KIR3DS1Q14943 382 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 CDKN1BP46527 198 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 DEFB135Q30KP9 77 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 OXLD1Q5BKU9 147 aa8.73□□□□□ -1.01
SNX13-202ENST00000409604 MT-ND6P03923 174 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 EIF4E3Q8N5X7 224 aaKnown RBP8.72□□□□□ -1.01
SNX13-202ENST00000409604 C7orf71A4D174 169 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 F5H768 121 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 SERF1AO75920 110 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 EGR2P11161 476 aaPredicted RBP8.72□□□□□ -1.01
SNX13-202ENST00000409604 VWC2Q2TAL6 325 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 A0A0J9YY99 117 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 PDE6HQ13956 83 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 ORMDL3Q8N138 153 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 OR10AG1Q8NH19 301 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 PIFOQ8TCI5 191 aa8.72□□□□□ -1.01
SNX13-202ENST00000409604 OR10J3Q5JRS4 329 aa8.71□□□□□ -1.01
SNX13-202ENST00000409604 NIPBLQ6KC79 2804 aaeCLIP8.71□□□□□ -1.01
SNX13-202ENST00000409604 CDX1P47902 265 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms