RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PRORSD1PA6NEY8 169 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 H3BQV1 296 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 SPINK1P00995 79 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 TRACP01848 142 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 GYPBP06028 91 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 FABP2P12104 132 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 SNRPD3P62318 126 aaKnown RBP-0.23□□□□□ -2.45
PMS1-203ENST00000409593 OR5AK2Q8NH90 309 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 GRPEL2Q8TAA5 225 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 CIB3Q96Q77 187 aaPredicted RBP-0.23□□□□□ -2.45
PMS1-203ENST00000409593 MRPL35Q9NZE8 188 aaKnown RBP-0.23□□□□□ -2.45
PMS1-203ENST00000409593 DLC1Q96QB1 1528 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 CPDO75976 1380 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 ESPL1Q14674 2120 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 ABCA1O95477 2261 aa-0.23□□□□□ -2.45
PMS1-203ENST00000409593 A0A1W2PPB8 328 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 KIR3DP1A8MWS1 328 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 CRYBA4P53673 196 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 NDUFA6P56556 154 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 TCTEX1D1Q8N7M0 179 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 OR5H6Q8NGV6 325 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 NEK7Q8TDX7 302 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 AP3S1Q92572 193 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 NUBP2Q9Y5Y2 271 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.24□□□□□ -2.45
PMS1-203ENST00000409593 TRPM7Q96QT4 1865 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 TANC1Q9C0D5 1861 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 LOC107984156A0A0G2JMH3 177 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 TMEM238C9JI98 176 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 FXYD1O00168 92 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 IGF2P01344 180 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 IGKCP01834 107 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 MAXP61244 160 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 LYPD5Q6UWN5 251 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 TMED4Q7Z7H5 227 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 ARL17AQ8IVW1 177 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 OR4B1Q8NGF8 309 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 PRELID3AQ96N28 172 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 MED11Q9P086 117 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 MRPL36Q9P0J6 103 aaKnown RBP-0.24□□□□□ -2.45
PMS1-203ENST00000409593 MPC1Q9Y5U8 109 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 ASXL3Q9C0F0 2248 aa-0.24□□□□□ -2.45
PMS1-203ENST00000409593 FLNCQ14315 2725 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 CACNA1AO00555 2505 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 F8P00451 2351 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.25□□□□□ -2.45
PMS1-203ENST00000409593 WDR97A6NE52 1622 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 CDC42EP2O14613 210 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 S100A11P31949 105 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 MRPS15P82914 257 aaKnown RBP-0.25□□□□□ -2.45
PMS1-203ENST00000409593 Q5BKY6 102 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 C3orf62Q6ZUJ4 267 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 VMO1Q7Z5L0 202 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 TEX29Q8N6K0 151 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 TMEM229BQ8NBD8 167 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 ISOC1Q96CN7 298 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 AP1S3Q96PC3 154 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 TENM4Q6N022 2769 aa-0.25□□□□□ -2.45
PMS1-203ENST00000409593 ABCA13Q86UQ4 5058 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 USH2AO75445 5202 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 TRBV27A0A0K0K1C4 114 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 HIGD1CA8MV81 97 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 C5orf58C9J3I9 102 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 SAA1P0DJI8 122 aaPredicted RBP-0.26□□□□□ -2.45
PMS1-203ENST00000409593 SDC2P34741 201 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 TMEM78Q5T7P6 136 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 HRCT1Q6UXD1 115 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 STX19Q8N4C7 294 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 FAM24BQ8N5W8 94 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 MORN4Q8NDC4 146 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 DYDC1Q8WWB3 177 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 STOML2Q9UJZ1 356 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 TANC2Q9HCD6 1990 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 ATG2AQ2TAZ0 1938 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 CSMD3Q7Z407 3707 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 CDK12Q9NYV4 1490 aaPredicted RBP-0.26□□□□□ -2.45
PMS1-203ENST00000409593 NUP210Q8TEM1 1887 aaPredicted RBP-0.26□□□□□ -2.45
PMS1-203ENST00000409593 SYNMO15061 1565 aa-0.26□□□□□ -2.45
PMS1-203ENST00000409593 YTHDC2Q9H6S0 1430 aaKnown RBP-0.27□□□□□ -2.45
PMS1-203ENST00000409593 AFDNP55196 1824 aaKnown RBP-0.27□□□□□ -2.45
PMS1-203ENST00000409593 CACNA1CQ13936 2221 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 ARL5CA6NH57 179 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 BBIP1A8MTZ0 92 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 BCL2P10415 239 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 SLC25A4P12235 298 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 TPT1P13693 172 aaKnown RBP-0.27□□□□□ -2.45
PMS1-203ENST00000409593 SERPINB1P30740 379 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 TCTAP57738 103 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 DNAJB13P59910 316 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 DCUN1D2Q6PH85 259 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 OR51A4Q8NGJ6 313 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 BOLA2Q9H3K6 86 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 C19orf12Q9NSK7 152 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 U3KQA8 63 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 RREB1Q92766 1687 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 WNK2Q9Y3S1 2297 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 MAP2P11137 1827 aaKnown RBP-0.27□□□□□ -2.45
PMS1-203ENST00000409593 BLMP54132 1417 aaPredicted RBP-0.27□□□□□ -2.45
PMS1-203ENST00000409593 TRBV7-6A0A0J9YX20 115 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 A0A1W2PRE2 83 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms