RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 PRB2P02812 416 aaPredicted RBP11.21□□□□□ -0.61
AP1S3-204ENST00000409375 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
AP1S3-204ENST00000409375 FRMD6-AS1P0C7T7 363 aa11.21□□□□□ -0.61
AP1S3-204ENST00000409375 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
AP1S3-204ENST00000409375 FXYD7P58549 80 aa11.21□□□□□ -0.61
AP1S3-204ENST00000409375 TMEM241Q24JQ0 296 aa11.21□□□□□ -0.61
AP1S3-204ENST00000409375 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.61
AP1S3-204ENST00000409375 NAT8Q9UHE5 227 aa11.21□□□□□ -0.61
AP1S3-204ENST00000409375 TRBV20OR9-2A0A075B6H5 130 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 J3KRW8 73 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 GCGP01275 180 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 RNASE4P34096 147 aaKnown RBP11.2□□□□□ -0.62
AP1S3-204ENST00000409375 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
AP1S3-204ENST00000409375 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 MRAPQ8TCY5 172 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 TVP23CQ96ET8 276 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 MLST8Q9BVC4 326 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 SEC11CQ9BY50 192 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 XCL2Q9UBD3 114 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 GOLT1BQ9Y3E0 138 aa11.2□□□□□ -0.62
AP1S3-204ENST00000409375 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
AP1S3-204ENST00000409375 PNRC1Q12796 327 aaPredicted RBP11.19□□□□□ -0.62
AP1S3-204ENST00000409375 FAM162BQ5T6X4 162 aa11.19□□□□□ -0.62
AP1S3-204ENST00000409375 GFI1BQ5VTD9 330 aa11.19□□□□□ -0.62
AP1S3-204ENST00000409375 Q6AWC8 147 aa11.19□□□□□ -0.62
AP1S3-204ENST00000409375 NHLRC2Q8NBF2 726 aa11.19□□□□□ -0.62
AP1S3-204ENST00000409375 DAZAP1Q96EP5 407 aaKnown RBP11.19□□□□□ -0.62
AP1S3-204ENST00000409375 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
AP1S3-204ENST00000409375 TMEM208Q9BTX3 173 aa11.19□□□□□ -0.62
AP1S3-204ENST00000409375 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
AP1S3-204ENST00000409375 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
AP1S3-204ENST00000409375 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
AP1S3-204ENST00000409375 TRAV12-3A0A0B4J271 114 aa11.18□□□□□ -0.62
AP1S3-204ENST00000409375 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
AP1S3-204ENST00000409375 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
AP1S3-204ENST00000409375 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
AP1S3-204ENST00000409375 Q6ZWC4 215 aa11.18□□□□□ -0.62
AP1S3-204ENST00000409375 H7BYZ3 331 aa11.17□□□□□ -0.62
AP1S3-204ENST00000409375 CRXO43186 299 aaPredicted RBP11.17□□□□□ -0.62
AP1S3-204ENST00000409375 ATP6V1G1O75348 118 aa11.17□□□□□ -0.62
AP1S3-204ENST00000409375 BTN1A1Q13410 526 aa11.17□□□□□ -0.62
AP1S3-204ENST00000409375 LINC01551Q86U37 167 aa11.17□□□□□ -0.62
AP1S3-204ENST00000409375 OCC1Q8TAD7 63 aa11.17□□□□□ -0.62
AP1S3-204ENST00000409375 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 IGLV2-8P01709 118 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 ADIRFQ15847 76 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 PYGO2Q9BRQ0 406 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 SDF2L1Q9HCN8 221 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 TP53TG1Q9Y2A0 90 aa11.16□□□□□ -0.62
AP1S3-204ENST00000409375 DEFA6Q01524 100 aa11.15□□□□□ -0.62
AP1S3-204ENST00000409375 PRR9Q5T870 116 aa11.15□□□□□ -0.62
AP1S3-204ENST00000409375 RCHY1Q96PM5 261 aa11.15□□□□□ -0.62
AP1S3-204ENST00000409375 LINC01587Q99440 93 aa11.15□□□□□ -0.62
AP1S3-204ENST00000409375 SH2D1AO60880 128 aa11.14□□□□□ -0.63
AP1S3-204ENST00000409375 P01737 135 aa11.14□□□□□ -0.63
AP1S3-204ENST00000409375 GIG44P09565 113 aaPredicted RBP11.14□□□□□ -0.63
AP1S3-204ENST00000409375 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
AP1S3-204ENST00000409375 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
AP1S3-204ENST00000409375 DEFB135Q30KP9 77 aa11.14□□□□□ -0.63
AP1S3-204ENST00000409375 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
AP1S3-204ENST00000409375 CSNK1G2-AS1Q8NCQ2 148 aa11.14□□□□□ -0.63
AP1S3-204ENST00000409375 NBEAL1Q6ZS30 2694 aa11.14□□□□□ -0.63
AP1S3-204ENST00000409375 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 IGHV1OR15-1A0A075B7D0 117 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 SPRY2O43597 315 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 ZNF324O75467 553 aaPredicted RBP11.13□□□□□ -0.63
AP1S3-204ENST00000409375 ORM1P02763 201 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 ZNF80P51504 273 aaPredicted RBP11.13□□□□□ -0.63
AP1S3-204ENST00000409375 ERVFC1-1P60608 527 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 IBA57Q5T440 356 aaKnown RBP11.13□□□□□ -0.63
AP1S3-204ENST00000409375 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 ISOC2Q96AB3 205 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 RNF183Q96D59 192 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 LINC00467Q9BRT7 94 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 NAGKQ9UJ70 344 aa11.13□□□□□ -0.63
AP1S3-204ENST00000409375 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 SMIM9A6NGZ8 99 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 K7EN84 100 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 M0R036 132 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 CRIP1P50238 77 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 RPS20P60866 119 aaKnown RBP11.12□□□□□ -0.63
AP1S3-204ENST00000409375 OR5I1Q13606 314 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 ZNF705AQ6ZN79 300 aaPredicted RBP11.12□□□□□ -0.63
AP1S3-204ENST00000409375 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 NEU1Q99519 415 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 SPATA25Q9BR10 227 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
AP1S3-204ENST00000409375 TMEM189A5PLL7 270 aa11.11□□□□□ -0.63
AP1S3-204ENST00000409375 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
AP1S3-204ENST00000409375 B4DEV8 164 aa11.11□□□□□ -0.63
AP1S3-204ENST00000409375 GATCO43716 136 aaKnown RBP11.11□□□□□ -0.63
AP1S3-204ENST00000409375 RRN3P1Q2M238 152 aa11.11□□□□□ -0.63
AP1S3-204ENST00000409375 TDRG1Q3Y452 100 aa11.11□□□□□ -0.63
AP1S3-204ENST00000409375 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
AP1S3-204ENST00000409375 SVBPQ8N300 66 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms