RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 SLC50A1Q9BRV3 221 aa12.7□□□□□ -0.38
COL23A1-202ENST00000407622 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 S100A7P31151 101 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 RAB9AP51151 201 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 LGALS9CQ6DKI2 356 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 BRD3OSQ6XYD6 125 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 DEFB125Q8N687 156 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 IFI27L1Q96BM0 104 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 ZNF462Q96JM2 2506 aa12.69□□□□□ -0.38
COL23A1-202ENST00000407622 TRGV3P03979 118 aa12.68□□□□□ -0.38
COL23A1-202ENST00000407622 C12orf54Q6X4T0 127 aa12.68□□□□□ -0.38
COL23A1-202ENST00000407622 C18orf15Q96N68 181 aa12.68□□□□□ -0.38
COL23A1-202ENST00000407622 METTL26Q96S19 204 aa12.68□□□□□ -0.38
COL23A1-202ENST00000407622 TRBV7-1A0A0A6YYK4 115 aa12.68□□□□□ -0.38
COL23A1-202ENST00000407622 IGHV4-39P01824 125 aa12.68□□□□□ -0.38
COL23A1-202ENST00000407622 CELSR2Q9HCU4 2923 aa12.68□□□□□ -0.38
COL23A1-202ENST00000407622 CBY3A6NI87 242 aa12.67□□□□□ -0.38
COL23A1-202ENST00000407622 PIFOQ8TCI5 191 aa12.67□□□□□ -0.38
COL23A1-202ENST00000407622 DKK2Q9UBU2 259 aa12.67□□□□□ -0.38
COL23A1-202ENST00000407622 TNFRSF6BO95407 300 aa12.67□□□□□ -0.38
COL23A1-202ENST00000407622 TRBV12-3P01733 135 aa12.67□□□□□ -0.38
COL23A1-202ENST00000407622 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
COL23A1-202ENST00000407622 U3KQE9 123 aa12.67□□□□□ -0.38
COL23A1-202ENST00000407622 VAMP3Q15836 100 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 MAP1LC3AQ9H492 121 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 SPG11Q96JI7 2443 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 TRAV41A0A0B4J266 112 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 IGHV7-4-1A0A0J9YVY3 117 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 IGF1P05019 195 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 C19orf54Q5BKX5 351 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 TMEM78Q5T7P6 136 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 PRR9Q5T870 116 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 C20orf173Q96LM9 149 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 DOPEY1Q5JWR5 2465 aa12.66□□□□□ -0.38
COL23A1-202ENST00000407622 USP9XQ93008 2570 aaPredicted RBP12.66□□□□□ -0.38
COL23A1-202ENST00000407622 LEPP41159 167 aa12.65□□□□□ -0.38
COL23A1-202ENST00000407622 UNQ9165/PRO28630Q6UXU0 137 aa12.65□□□□□ -0.39
COL23A1-202ENST00000407622 RNASE8Q8TDE3 154 aaKnown RBP12.65□□□□□ -0.39
COL23A1-202ENST00000407622 MOB4Q9Y3A3 225 aa12.65□□□□□ -0.39
COL23A1-202ENST00000407622 TRAV26-2A0A0B4J265 109 aa12.64□□□□□ -0.39
COL23A1-202ENST00000407622 TRAV40A0A0B4J280 105 aa12.64□□□□□ -0.39
COL23A1-202ENST00000407622 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
COL23A1-202ENST00000407622 DEFB1P60022 68 aa12.64□□□□□ -0.39
COL23A1-202ENST00000407622 MYO18BQ8IUG5 2567 aa12.64□□□□□ -0.39
COL23A1-202ENST00000407622 PPBPP02775 128 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 DPF1Q92782 380 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 IGHV4-61A0A0C4DH41 118 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 LINC01546A6NGU7 62 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 J3KRW8 73 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 C9orf47Q6ZRZ4 202 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 BOD1L2Q8IYS8 172 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 GLMPQ8WWB7 406 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 C16orf92Q96LL3 132 aa12.63□□□□□ -0.39
COL23A1-202ENST00000407622 SRSF1Q07955 248 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL23A1-202ENST00000407622 GPHB5Q86YW7 130 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 IGHV1-69DA0A0B4J2H0 117 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 SPRY2O43597 315 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 CD5LO43866 347 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 ARL3P36405 182 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 LY6EQ16553 131 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 OR4C5Q8NGB2 326 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
COL23A1-202ENST00000407622 MRPL53Q96EL3 112 aaKnown RBP12.62□□□□□ -0.39
COL23A1-202ENST00000407622 IGLV2-18A0A075B6J9 118 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 TRAV8-6A0A0B4J262 113 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 IGHV4-38-2P0DP08 117 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 FCER1GP30273 86 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 AMMECR1LQ6DCA0 310 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 SELENOKQ9Y6D0 94 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
COL23A1-202ENST00000407622 NMUP48645 174 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 TMEM158Q8WZ71 300 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 SPOCK3Q9BQ16 436 aa12.61□□□□□ -0.39
COL23A1-202ENST00000407622 H3BVH4 76 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 NPFFR1Q9GZQ6 430 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
COL23A1-202ENST00000407622 FAM223BA6NKX1 122 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 K7EP13 123 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 IGHV3-11P01762 117 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 ODF1Q14990 250 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 LCNL1Q6ZST4 164 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 FAM223AQ8IWN6 122 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 NRACQ8N912 160 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 OR2K2Q8NGT1 345 aa12.6□□□□□ -0.39
COL23A1-202ENST00000407622 Q6ZS46 218 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 CRYBG3Q68DQ2 2970 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 CSMD2Q7Z408 3487 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 IGKV2D-26A0A0A0MRZ7 120 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 C7orf71A4D174 169 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 CRIP2P52943 208 aaPredicted RBP12.59□□□□□ -0.39
COL23A1-202ENST00000407622 Q8N8P6 123 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 KLK15Q9H2R5 256 aa12.59□□□□□ -0.39
COL23A1-202ENST00000407622 ADAMTSL5Q6ZMM2 481 aa12.58□□□□□ -0.4
COL23A1-202ENST00000407622 HIF1ANQ9NWT6 349 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms