RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 NAGKQ9UJ70 344 aa18.68■□□□□ 0.58
DNMT3A-206ENST00000406659 IGHV4OR15-8A0A075B7B6 117 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 A0A087WW49 117 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 HSBP1O75506 76 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 NTF3P20783 257 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 ID1P41134 155 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 SAMD13Q5VXD3 122 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 REC114Q7Z4M0 266 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 NIT1Q86X76 327 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 ZNF575Q86XF7 245 aa18.67■□□□□ 0.58
DNMT3A-206ENST00000406659 MUC21A0A0G2JKD1 596 aa18.66■□□□□ 0.58
DNMT3A-206ENST00000406659 MUC21A0A140T8X8 626 aa18.66■□□□□ 0.58
DNMT3A-206ENST00000406659 MUC21Q5SSG8 566 aa18.66■□□□□ 0.58
DNMT3A-206ENST00000406659 FAM19A2Q8N3H0 131 aa18.66■□□□□ 0.58
DNMT3A-206ENST00000406659 SYNJ2BPP57105 145 aa18.65■□□□□ 0.58
DNMT3A-206ENST00000406659 LGALS9O00182 355 aa18.65■□□□□ 0.58
DNMT3A-206ENST00000406659 CD33P20138 364 aa18.65■□□□□ 0.58
DNMT3A-206ENST00000406659 TWIST1Q15672 202 aa18.65■□□□□ 0.58
DNMT3A-206ENST00000406659 KLHDC1Q8N7A1 406 aa18.65■□□□□ 0.58
DNMT3A-206ENST00000406659 LINC00587B1AMM8 73 aa18.64■□□□□ 0.57
DNMT3A-206ENST00000406659 PKIAP61925 76 aa18.64■□□□□ 0.57
DNMT3A-206ENST00000406659 WFDC3Q8IUB2 231 aa18.64■□□□□ 0.57
DNMT3A-206ENST00000406659 OR8A1Q8NGG7 326 aa18.64■□□□□ 0.57
DNMT3A-206ENST00000406659 C11orf21Q9P2W6 132 aa18.64■□□□□ 0.57
DNMT3A-206ENST00000406659 IGKV3D-20A0A0C4DH25 116 aa18.63■□□□□ 0.57
DNMT3A-206ENST00000406659 HOXD3P31249 432 aaPredicted RBP18.63■□□□□ 0.57
DNMT3A-206ENST00000406659 DEFB1P60022 68 aa18.63■□□□□ 0.57
DNMT3A-206ENST00000406659 CD5LO43866 347 aa18.63■□□□□ 0.57
DNMT3A-206ENST00000406659 YAE1D1Q9NRH1 226 aa18.63■□□□□ 0.57
DNMT3A-206ENST00000406659 NBPF19A0A087WUL8 3843 aa18.62■□□□□ 0.57
DNMT3A-206ENST00000406659 KRTDAPP60985 99 aa18.62■□□□□ 0.57
DNMT3A-206ENST00000406659 FAM104BQ5XKR9 115 aa18.62■□□□□ 0.57
DNMT3A-206ENST00000406659 DCANP1Q8TF63 244 aa18.62■□□□□ 0.57
DNMT3A-206ENST00000406659 PRO1933Q9H354 126 aa18.62■□□□□ 0.57
DNMT3A-206ENST00000406659 DNAJC9-AS1A6NH13 148 aa18.61■□□□□ 0.57
DNMT3A-206ENST00000406659 F6UB75 175 aa18.61■□□□□ 0.57
DNMT3A-206ENST00000406659 TSTD3H0UI37 97 aa18.61■□□□□ 0.57
DNMT3A-206ENST00000406659 M0R2Z0 102 aa18.61■□□□□ 0.57
DNMT3A-206ENST00000406659 CHCHD1Q96BP2 118 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-206ENST00000406659 HELZ2Q9BYK8 2649 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-206ENST00000406659 KRTAP1-1Q07627 177 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 PRR9Q5T870 116 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 ZFAND2AQ8N6M9 145 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 URB1-AS1Q96HZ7 61 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 MS4A6AQ9H2W1 248 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 CCDC168Q8NDH2 2452 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 J3KRW8 73 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 M0QZ24 198 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 CNFNQ9BYD5 112 aa18.6■□□□□ 0.57
DNMT3A-206ENST00000406659 PDZD2O15018 2839 aa18.59■□□□□ 0.57
DNMT3A-206ENST00000406659 LINC00614P0C842 121 aa18.59■□□□□ 0.57
DNMT3A-206ENST00000406659 AMN1Q8IY45 258 aa18.59■□□□□ 0.57
DNMT3A-206ENST00000406659 TFPI2P48307 235 aa18.58■□□□□ 0.57
DNMT3A-206ENST00000406659 RNF114Q9Y508 228 aa18.58■□□□□ 0.57
DNMT3A-206ENST00000406659 TRAV21A0A0B4J279 112 aa18.58■□□□□ 0.56
DNMT3A-206ENST00000406659 Q6ZQT7 251 aa18.58■□□□□ 0.56
DNMT3A-206ENST00000406659 Q6ZSV7 163 aa18.58■□□□□ 0.56
DNMT3A-206ENST00000406659 C18orf65Q6ZTR6 163 aa18.58■□□□□ 0.56
DNMT3A-206ENST00000406659 ZNF664Q8N3J9 261 aa18.58■□□□□ 0.56
DNMT3A-206ENST00000406659 FAM19A4Q96LR4 140 aa18.58■□□□□ 0.56
DNMT3A-206ENST00000406659 TLN2Q9Y4G6 2542 aa18.57■□□□□ 0.56
DNMT3A-206ENST00000406659 TRBV7-9A0A0J9YWB2 115 aa18.57■□□□□ 0.56
DNMT3A-206ENST00000406659 C2orf70A6NJV1 201 aa18.57■□□□□ 0.56
DNMT3A-206ENST00000406659 TMEM191AQ9H0A3 160 aa18.57■□□□□ 0.56
DNMT3A-206ENST00000406659 U3KQK5 164 aa18.57■□□□□ 0.56
DNMT3A-206ENST00000406659 CSN3P07498 182 aa18.56■□□□□ 0.56
DNMT3A-206ENST00000406659 FLNAP21333 2647 aaKnown RBP18.56■□□□□ 0.56
DNMT3A-206ENST00000406659 MRPL51Q4U2R6 128 aaKnown RBP18.56■□□□□ 0.56
DNMT3A-206ENST00000406659 DMRTA1Q5VZB9 504 aa18.56■□□□□ 0.56
DNMT3A-206ENST00000406659 MSRB1Q9NZV6 116 aa18.56■□□□□ 0.56
DNMT3A-206ENST00000406659 D6R8Y8 96 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 LINC01619G3V211 115 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 RNASE4P34096 147 aaKnown RBP18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 DEFB136Q30KP8 78 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 KHDC1LQ5JSQ8 128 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 C4orf3Q8WVX3 66 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 C3orf79P0CE67 100 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 SLURP1P55000 103 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 SNRPD3P62318 126 aaKnown RBP18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 ORMDL3Q8N138 153 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 DPF1Q92782 380 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 PRELID3AQ96N28 172 aa18.55■□□□□ 0.56
DNMT3A-206ENST00000406659 K7EQG2 157 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 ZNF688P0C7X2 276 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 TCTEX1D4Q5JR98 221 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 PSMG4Q5JS54 123 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 ESM1Q9NQ30 184 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 CKS2P33552 79 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 PMCHL1Q16048 86 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 APRG1Q8IVJ8 170 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 PRSS3P2Q8NHM4 247 aa18.53■□□□□ 0.56
DNMT3A-206ENST00000406659 OR5AL1P0C617 328 aa18.52■□□□□ 0.55
DNMT3A-206ENST00000406659 OR11H1Q8NG94 326 aa18.52■□□□□ 0.55
DNMT3A-206ENST00000406659 OR1N2Q8NGR9 330 aa18.52■□□□□ 0.55
DNMT3A-206ENST00000406659 IGHV1-24A0A0C4DH33 117 aa18.51■□□□□ 0.55
DNMT3A-206ENST00000406659 TEX43Q6ZNM6 134 aa18.51■□□□□ 0.55
DNMT3A-206ENST00000406659 FA2HQ7L5A8 372 aa18.51■□□□□ 0.55
DNMT3A-206ENST00000406659 OR10AG1Q8NH19 301 aa18.51■□□□□ 0.55
DNMT3A-206ENST00000406659 ZNF469Q96JG9 3925 aaPredicted RBP18.51■□□□□ 0.55
DNMT3A-206ENST00000406659 SNAI2O43623 268 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms