RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MANBALQ9NQG1 85 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM242Q9NWH2 141 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 FKBP11Q9NYL4 201 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 FREM2Q5SZK8 3169 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 WDFY4Q6ZS81 3184 aa2.84□□□□□ -1.95
HMGB3P18-201ENST00000406327 BDP1A6H8Y1 2624 aa2.84□□□□□ -1.96
HMGB3P18-201ENST00000406327 RTTNQ86VV8 2226 aa2.84□□□□□ -1.96
HMGB3P18-201ENST00000406327 AHCTF1Q8WYP5 2266 aa2.84□□□□□ -1.96
HMGB3P18-201ENST00000406327 PCNX2A6NKB5 2137 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 MED13Q9UHV7 2174 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGHV1-69-2A0A0G2JMI3 117 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 TEX50A0A1B0GTY4 177 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 FNDC10F2Z333 226 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 HMGB3O15347 200 aaKnown RBP2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 CXorf1O96002 111 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 CA2P00918 260 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGKV1-16P04430 117 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 CXCL1P09341 107 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 NTF3P20783 257 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 CA7P43166 264 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 LGALS7P47929 136 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 CDC34P49427 236 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 DLX6P56179 175 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 PRCDQ00LT1 54 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 ELOBQ15370 118 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 TMEM155Q4W5P6 130 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 CYP2G1PQ6ZSU1 146 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 FA2HQ7L5A8 372 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 TMEM144Q7Z5S9 345 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 MIR7-3HGQ8N6C7 128 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR4A5Q8NH83 315 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 Q8WTZ3 238 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 H1FXQ92522 213 aaKnown RBP2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 MGST2Q99735 147 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 SMIM7Q9BQ49 75 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 ANAPC13Q9BS18 74 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 DYNLRB1Q9NP97 96 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 BET1LQ9NYM9 111 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 METTL1Q9UBP6 276 aaKnown RBP2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 NAT8Q9UHE5 227 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 PXMP4Q9Y6I8 212 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 WDFY3Q8IZQ1 3526 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 MYO15AQ9UKN7 3530 aa2.83□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRBV24-1A0A075B6N3 115 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 TGIF2-C20orf24A0A0A6YYL0 155 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 ZNF98A6NK75 572 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 F6UZH7 168 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 TGOLN2O43493 480 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 PDE6DO43924 150 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 APOA2P02652 100 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 S100A6P06703 90 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 PFN1P07737 140 aaKnown RBP2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 SAA1P0DJI8 122 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 RNASE2P10153 161 aaKnown RBP2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 DEFA4P12838 97 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 NPPCP23582 126 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 COL8A2P25067 703 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 GCHFRP30047 84 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 AKR1D1P51857 326 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 ZNF137PP52743 207 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 B2MP61769 119 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 RHOBP62745 196 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 ERHP84090 104 aaKnown RBP2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 FABP9Q0Z7S8 132 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR10J3Q5JRS4 329 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 ST6GALNAC3Q8NDV1 305 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR4C13Q8NGP0 309 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR1L8Q8NGR8 309 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR10X1Q8NGY0 326 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 VSTM2AQ8TAG5 236 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 TMEM167AQ8TBQ9 72 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 NABP2Q9BQ15 211 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 TXNDC17Q9BRA2 123 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 COMMD5Q9GZQ3 224 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 NDUFA4L2Q9NRX3 87 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 KCNIP2Q9NS61 270 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 DOK5Q9P104 306 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 SHANK1Q9Y566 2161 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 ZNF407Q9C0G0 2248 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 MUC3AQ02505 3323 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 NCOR1O75376 2440 aa2.82□□□□□ -1.96
HMGB3P18-201ENST00000406327 FREM1Q5H8C1 2179 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 OTOGLQ3ZCN5 2332 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGHV2-26A0A0B4J1V2 119 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRAV8-2A0A0B4J237 113 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 A0A1B0GXF2 115 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 LRCOL1A6NCL2 159 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 E7EUB6 86 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 LYNX1G3V0Z9 82 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 MT-CO2P00403 227 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRGC2P03986 189 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 S100A8P05109 93 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 ARL14EPLP0DKL9 152 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 LYNX1P0DP58 116 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 CD28P10747 220 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 TSPOP30536 169 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 REG1BP48304 166 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms