RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 IGSF10Q6WRI0 2623 aa12.02□□□□□ -0.48
ATG4B-205ENST00000404914 CCDC144NLQ6NUI1 221 aa12.02□□□□□ -0.48
ATG4B-205ENST00000404914 DYNAPQ8N1N2 210 aa12.02□□□□□ -0.48
ATG4B-205ENST00000404914 ZNF479Q96JC4 524 aa12.02□□□□□ -0.48
ATG4B-205ENST00000404914 C11orf21Q9P2W6 132 aa12.02□□□□□ -0.48
ATG4B-205ENST00000404914 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.49
ATG4B-205ENST00000404914 DPM2O94777 84 aa12.02□□□□□ -0.49
ATG4B-205ENST00000404914 C12orf74Q32Q52 190 aa12.02□□□□□ -0.49
ATG4B-205ENST00000404914 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
ATG4B-205ENST00000404914 DYNLRB1Q9NP97 96 aa12.02□□□□□ -0.49
ATG4B-205ENST00000404914 MED13LQ71F56 2210 aa12.02□□□□□ -0.49
ATG4B-205ENST00000404914 LY6LH3BQJ8 138 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 EFNA4P52798 201 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 NDPQ00604 133 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 ATP5G2Q06055 141 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 CD300EQ496F6 205 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-205ENST00000404914 RALYQ9UKM9 306 aaKnown RBP12.01□□□□□ -0.49
ATG4B-205ENST00000404914 IGFL3Q6UXB1 125 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 RNF182Q8N6D2 247 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 CFHR4Q92496 578 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 NBASA2RRP1 2371 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 E7EQL1 145 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 UCNP55089 124 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 TNFRSF14Q92956 283 aa12.01□□□□□ -0.49
ATG4B-205ENST00000404914 SHISA9B4DS77 424 aa12□□□□□ -0.49
ATG4B-205ENST00000404914 NDUFA3O95167 84 aa12□□□□□ -0.49
ATG4B-205ENST00000404914 IL17RELQ6ZVW7 336 aa12□□□□□ -0.49
ATG4B-205ENST00000404914 CNFNQ9BYD5 112 aa12□□□□□ -0.49
ATG4B-205ENST00000404914 IGLV11-55A0A075B6I3 123 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 VSTM5A8MXK1 200 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 Q6ZS92 163 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 NXT2Q9NPJ8 142 aaKnown RBP11.99□□□□□ -0.49
ATG4B-205ENST00000404914 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 IGKV3D-20A0A0C4DH25 116 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 COL6A6A6NMZ7 2263 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 BMI1P35226 326 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 KLRD1Q13241 179 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 WFDC12Q8WWY7 111 aa11.99□□□□□ -0.49
ATG4B-205ENST00000404914 CFAP46Q8IYW2 2715 aa11.98□□□□□ -0.49
ATG4B-205ENST00000404914 NBR2O15453 112 aa11.98□□□□□ -0.49
ATG4B-205ENST00000404914 Q5PR19 223 aa11.98□□□□□ -0.49
ATG4B-205ENST00000404914 Q8N8P6 123 aa11.98□□□□□ -0.49
ATG4B-205ENST00000404914 PRORYQ9H606 182 aa11.98□□□□□ -0.49
ATG4B-205ENST00000404914 ONECUT1Q9UBC0 465 aa11.98□□□□□ -0.49
ATG4B-205ENST00000404914 SMPXQ9UHP9 88 aa11.98□□□□□ -0.49
ATG4B-205ENST00000404914 IGHV3-66A0A0C4DH42 116 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 F8W1H4 67 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 SPRY2O43597 315 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 MFAP4P55083 255 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 Q8NA96 180 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 FAM57AQ8TBR7 257 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 SPATA25Q9BR10 227 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 IGHV3OR16-13A0A075B7E8 117 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 IGHV3-74A0A0B4J1X5 117 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 NRACQ8N912 160 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 FABP5P3A8MUU1 101 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 CTSGP08311 255 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 LY6DQ14210 128 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 HIST1H4GQ99525 98 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 C21orf62Q9NYP8 219 aa11.97□□□□□ -0.49
ATG4B-205ENST00000404914 RPL7P18124 248 aaKnown RBP11.96□□□□□ -0.49
ATG4B-205ENST00000404914 HES1Q14469 280 aa11.96□□□□□ -0.49
ATG4B-205ENST00000404914 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
ATG4B-205ENST00000404914 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.5
ATG4B-205ENST00000404914 ATP5LO75964 103 aa11.96□□□□□ -0.5
ATG4B-205ENST00000404914 LY6HO94772 140 aa11.96□□□□□ -0.5
ATG4B-205ENST00000404914 PRR30Q53SZ7 412 aaPredicted RBP11.96□□□□□ -0.5
ATG4B-205ENST00000404914 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
ATG4B-205ENST00000404914 SFTA2Q6UW10 78 aa11.95□□□□□ -0.5
ATG4B-205ENST00000404914 ATP6V0BQ99437 205 aa11.95□□□□□ -0.5
ATG4B-205ENST00000404914 SRSF8Q9BRL6 282 aaKnown RBP11.95□□□□□ -0.5
ATG4B-205ENST00000404914 KLK15Q9H2R5 256 aa11.95□□□□□ -0.5
ATG4B-205ENST00000404914 MORN3Q6PF18 240 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-205ENST00000404914 UFC1Q9Y3C8 167 aa11.95□□□□□ -0.5
ATG4B-205ENST00000404914 SCGB1A1P11684 91 aa11.94□□□□□ -0.5
ATG4B-205ENST00000404914 SRSF1Q07955 248 aaKnown RBP eCLIP11.94□□□□□ -0.56e-6■■□□□ 12.9
ATG4B-205ENST00000404914 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
ATG4B-205ENST00000404914 GAGE13Q4V321 117 aa11.94□□□□□ -0.5
ATG4B-205ENST00000404914 TMEM190Q8WZ59 177 aa11.94□□□□□ -0.5
ATG4B-205ENST00000404914 ZFHX3Q15911 3703 aa11.94□□□□□ -0.5
ATG4B-205ENST00000404914 A0A087WX48 190 aa11.94□□□□□ -0.5
ATG4B-205ENST00000404914 TTC9CQ8N5M4 171 aa11.94□□□□□ -0.5
ATG4B-205ENST00000404914 LAGE3Q14657 143 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 C5orf64Q2M2E5 130 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 IGHV7-4-1A0A0J9YVY3 117 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 SMCPP49901 116 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-205ENST00000404914 RAB9AP51151 201 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 RNF5Q99942 180 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 IGHV3-49A0A0A0MS15 119 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 MYOZ3Q8TDC0 251 aa11.93□□□□□ -0.5
ATG4B-205ENST00000404914 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
ATG4B-205ENST00000404914 A0A1B0GWB2 263 aa11.92□□□□□ -0.5
ATG4B-205ENST00000404914 HLA-DRB4P13762 266 aa11.92□□□□□ -0.5
ATG4B-205ENST00000404914 FHL3Q13643 280 aa11.92□□□□□ -0.5
ATG4B-205ENST00000404914 ZNF672Q499Z4 452 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-205ENST00000404914 NPBQ8NG41 125 aa11.92□□□□□ -0.5
ATG4B-205ENST00000404914 HLA-DRB4X5D2U9 266 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms