RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FOXE3Q13461 319 aa10.93□□□□□ -0.66
VAPA-202ENST00000400000 SOCS3O14543 225 aa10.93□□□□□ -0.66
VAPA-202ENST00000400000 LOXP28300 417 aaPredicted RBP10.93□□□□□ -0.66
VAPA-202ENST00000400000 C5orf38Q86SI9 138 aa10.93□□□□□ -0.66
VAPA-202ENST00000400000 LY6G6EA0A0G2JKS1 128 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 U3KQA8 63 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 TSC2P49815 1807 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
VAPA-202ENST00000400000 ZNF134P52741 427 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 IGHV4-30-2A0A087WSY4 118 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 HEATR5AQ86XA9 2040 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 KIAA1671Q9BY89 1806 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 ZNF524Q96C55 264 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 DSCR8Q96T75 97 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 SMIM2Q9BVW6 85 aa10.92□□□□□ -0.66
VAPA-202ENST00000400000 GATA3P23771 443 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 HIST2H2BDQ6DRA6 164 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 ZC2HC1AQ96GY0 325 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 FGF6P10767 208 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 ZNF833PQ6ZTB9 187 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 LYPD1Q8N2G4 141 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 TMEM14BQ9NUH8 114 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 BUB3O43684 328 aa10.91□□□□□ -0.66
VAPA-202ENST00000400000 ZFP36P26651 326 aaKnown RBP10.91□□□□□ -0.66
VAPA-202ENST00000400000 TRBV19A0A075B6N1 114 aa10.9□□□□□ -0.66
VAPA-202ENST00000400000 LINC01549A6NIU2 74 aa10.9□□□□□ -0.66
VAPA-202ENST00000400000 F8W735 103 aaPredicted RBP10.9□□□□□ -0.66
VAPA-202ENST00000400000 PIFOQ8TCI5 191 aa10.9□□□□□ -0.66
VAPA-202ENST00000400000 PROP1O75360 226 aa10.9□□□□□ -0.66
VAPA-202ENST00000400000 FAM231BA6NCW3 169 aa10.9□□□□□ -0.66
VAPA-202ENST00000400000 PROK2Q9HC23 129 aa10.9□□□□□ -0.66
VAPA-202ENST00000400000 KLF2Q9Y5W3 355 aaPredicted RBP10.9□□□□□ -0.66
VAPA-202ENST00000400000 DEFB113Q30KQ7 82 aa10.9□□□□□ -0.67
VAPA-202ENST00000400000 NDUFS6O75380 124 aaKnown RBP10.89□□□□□ -0.67
VAPA-202ENST00000400000 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
VAPA-202ENST00000400000 PLCE1Q9P212 2302 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 HIST2H2BCQ6DN03 193 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 RITA1Q96K30 269 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 SLAQ13239 276 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 ZNF664Q8N3J9 261 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 TSSC4Q9Y5U2 329 aaPredicted RBP10.89□□□□□ -0.67
VAPA-202ENST00000400000 TRBV24-1A0A075B6N3 115 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 WT1-ASQ06250 92 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 NDUFA12Q9UI09 145 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 THSD7BQ9C0I4 1608 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 IGHG4P01861 327 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 CHD3Q12873 2000 aaKnown RBP10.89□□□□□ -0.67
VAPA-202ENST00000400000 C9JQL5 133 aa10.89□□□□□ -0.67
VAPA-202ENST00000400000 IGHV7-4-1A0A0J9YVY3 117 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 ZGRF1Q86YA3 2104 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 NPBQ8NG41 125 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 FAM215AQ9Y5M1 114 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 PCNX1Q96RV3 2341 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 NDUFA4O00483 81 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 C1orf194Q5T5A4 169 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 WIPF2Q8TF74 440 aaPredicted RBP10.88□□□□□ -0.67
VAPA-202ENST00000400000 PRSS46E5RG02 174 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 CFHR4Q92496 578 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 RLFQ13129 1914 aa10.88□□□□□ -0.67
VAPA-202ENST00000400000 IGHV4-61A0A0C4DH41 118 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 NPYP01303 97 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 IGHV1-24A0A0C4DH33 117 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 GATA1P15976 413 aaPredicted RBP10.87□□□□□ -0.67
VAPA-202ENST00000400000 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 FAM104BQ5XKR9 115 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 PLXNA3P51805 1871 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 ADAMTS9Q9P2N4 1935 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 MAJINQ3KP22 176 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 ADCYAP1P18509 176 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 PYY3Q5JQD4 70 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 DYNAPQ8N1N2 210 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 NOTCH3Q9UM47 2321 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 Q8N8P6 123 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 BLCAPP62952 87 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 PRR25Q96S07 402 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 OVOL2Q9BRP0 275 aa10.87□□□□□ -0.67
VAPA-202ENST00000400000 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
VAPA-202ENST00000400000 H3BRN7 92 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 GYPEP15421 78 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 GP9P14770 177 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 BOD1L2Q8IYS8 172 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 DKK2Q9UBU2 259 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 NCR3O14931 201 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 DEFB1P60022 68 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 SIGLEC8Q9NYZ4 499 aa10.86□□□□□ -0.67
VAPA-202ENST00000400000 RMI2Q96E14 147 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 POLR3KQ9Y2Y1 108 aaPredicted RBP10.85□□□□□ -0.67
VAPA-202ENST00000400000 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 RHODO00212 210 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 ZNF726P1Q15940 193 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 C18orf32Q8TCD1 76 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 TRBV6-6A0A0A6YYG2 114 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
VAPA-202ENST00000400000 TMEM141Q96I45 108 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 NBASA2RRP1 2371 aa10.85□□□□□ -0.67
VAPA-202ENST00000400000 SRSF2Q01130 221 aaKnown RBP10.85□□□□□ -0.67
VAPA-202ENST00000400000 TRAV1-1A0A0B4J248 108 aa10.84□□□□□ -0.67
VAPA-202ENST00000400000 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms