RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 TIMM17AQ99595 171 aa9.77□□□□□ -0.85
CACNA1C-219ENST00000399649 SCN10AQ9Y5Y9 1956 aa9.77□□□□□ -0.85
CACNA1C-219ENST00000399649 ICOSQ9Y6W8 199 aa9.77□□□□□ -0.85
CACNA1C-219ENST00000399649 THADAQ6YHU6 1953 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 SEC61GP60059 68 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 WIPF3A6NGB9 483 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 C17orf82Q86X59 251 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 NDUFS7O75251 213 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 ACYP1P07311 99 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 C12orf74Q32Q52 190 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 CAMK2N2Q96S95 79 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 C9orf66Q5T8R8 295 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 NTN5Q8WTR8 489 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 DYNAPQ8N1N2 210 aa9.76□□□□□ -0.85
CACNA1C-219ENST00000399649 IGLV2-23P01705 113 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 C9orf47Q6ZRZ4 202 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 Q6ZWC4 215 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 BAALCQ8WXS3 180 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 LMO1P25800 156 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 LINC00311Q8N616 119 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 KLHDC3Q9BQ90 382 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 NCOR1P1Q9H4R4 102 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 K7EM74 188 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 C8orf31Q8N9H6 132 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 C14orf132Q9NPU4 83 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 GREB1Q4ZG55 1949 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 UBE2AP49459 152 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 CFC1BP0CG36 223 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 CFC1P0CG37 223 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 BRWD1Q9NSI6 2320 aa9.75□□□□□ -0.85
CACNA1C-219ENST00000399649 PRSS47A8MTI9 375 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 C16orf74Q96GX8 76 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 IGLL1P15814 213 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 CCL18P55774 89 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 CCL24O00175 119 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 ZNF493Q6ZR52 646 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 IGKV1-6A0A0C4DH72 117 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 GNRH2O43555 120 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 VSIG2Q96IQ7 327 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 DKK2Q9UBU2 259 aa9.74□□□□□ -0.85
CACNA1C-219ENST00000399649 A0A1B0GX51 115 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 TPSG1Q9NRR2 321 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 K7EMI3 77 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 K7EQD1 137 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 FXYD5Q96DB9 178 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 LOXP28300 417 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 SVIPQ8NHG7 77 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 LTAP01374 205 aa9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 DUX4L9Q6RFH8 374 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-219ENST00000399649 COX7A2LO14548 114 aa9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 ZNF726P1Q15940 193 aa9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 WDR86Q86TI4 376 aa9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 ARHGEF17Q96PE2 2063 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-219ENST00000399649 GYPEP15421 78 aa9.71□□□□□ -0.85
CACNA1C-219ENST00000399649 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.85
CACNA1C-219ENST00000399649 VPREB3Q9UKI3 123 aa9.71□□□□□ -0.85
CACNA1C-219ENST00000399649 PSMB8P28062 276 aa9.71□□□□□ -0.85
CACNA1C-219ENST00000399649 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 LCTP09848 1927 aa9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 ASXL3Q9C0F0 2248 aa9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 NCR3O14931 201 aa9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 NREPQ16612 68 aa9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 C11orf52Q96A22 123 aa9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 PROP1O75360 226 aa9.71□□□□□ -0.86
CACNA1C-219ENST00000399649 NPSP0C0P6 89 aa9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 FOXE3Q13461 319 aa9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 DNAJC13O75165 2243 aa9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 WT1-ASQ06250 92 aa9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 DAZ4Q86SG3 579 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 DAZ3Q9NR90 486 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 SPART-AS1P0CW21 52 aa9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 KMT2EQ8IZD2 1858 aa9.7□□□□□ -0.86
CACNA1C-219ENST00000399649 IGLC1P0CG04 106 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 ASPHD1Q5U4P2 390 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 ZFP2Q6ZN57 461 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 H0YGX0 51 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 SS18L2Q9UHA2 77 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 Q6ZR03 302 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 APRG1Q8IVJ8 170 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 PIFOQ8TCI5 191 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 DEFB112Q30KQ8 113 aa9.69□□□□□ -0.86
CACNA1C-219ENST00000399649 YLPM1P49750 1951 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms