RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 B4DSR2 109 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 TRGV3P03979 118 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 NTF3P20783 257 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 CSN1S1P47710 185 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 ATP5G2Q06055 141 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 LCNL1Q6ZST4 164 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 TPPP3Q9BW30 176 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 ZNF469Q96JG9 3925 aaPredicted RBP9.08□□□□□ -0.96
COL25A1-202ENST00000399127 TMSB15BA0A087X1C1 80 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 CLPSL1A2RUU4 121 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 CHEK1O14757 476 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 NPFFR1Q9GZQ6 430 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 APCP25054 2843 aa9.08□□□□□ -0.96
COL25A1-202ENST00000399127 TLN2Q9Y4G6 2542 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 CREBBPQ92793 2442 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 A0A1B0GXF2 115 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 BUB3O43684 328 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 TSPAN13O95857 204 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 IGHG4P01861 327 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 HBBP68871 147 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 CT83Q5H943 113 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 OR10J3Q5JRS4 329 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 RBPMS2Q6ZRY4 209 aaKnown RBP9.07□□□□□ -0.96
COL25A1-202ENST00000399127 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 PSMG3-AS1Q96PY0 264 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 VGLL1Q99990 258 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 K7EP34 96 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 TRBV12-3P01733 135 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 HERV-K104P63124 156 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 RASL11AQ6T310 242 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 C18orf32Q8TCD1 76 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
COL25A1-202ENST00000399127 BEX4Q9NWD9 120 aaPredicted RBP9.07□□□□□ -0.96
COL25A1-202ENST00000399127 TSSC4Q9Y5U2 329 aaPredicted RBP9.07□□□□□ -0.96
COL25A1-202ENST00000399127 TRBV7-1A0A0A6YYK4 115 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 IGHV3-11P01762 117 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 FOXA3P55318 350 aaPredicted RBP9.06□□□□□ -0.96
COL25A1-202ENST00000399127 TRBV6-1A0A0K0K1D8 114 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 TEX48A0A1B0GUV7 120 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 TGFAP01135 160 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 RPL24P83731 157 aaKnown RBP9.06□□□□□ -0.96
COL25A1-202ENST00000399127 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 C19orf54Q5BKX5 351 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 KLK15Q9H2R5 256 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
COL25A1-202ENST00000399127 A6NDX4 124 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 CD300EQ496F6 205 aaPredicted RBP9.05□□□□□ -0.96
COL25A1-202ENST00000399127 SLC25A34Q6PIV7 304 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 LINC01356Q8N9X3 169 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 Q96MF0 132 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 BRI3O95415 125 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 ARMS2P0C7Q2 107 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 ERCC8Q13216 396 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 AP1S3Q96PC3 154 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 GFRA4Q9GZZ7 299 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
COL25A1-202ENST00000399127 EBLN2Q6P2I7 272 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 METTL26Q96S19 204 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 A0A087X0K7 114 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 PF4V1P10720 104 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 GATA3P23771 443 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 ARL3P36405 182 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 UNQ9165/PRO28630Q6UXU0 137 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 PRR25Q96S07 402 aa9.04□□□□□ -0.96
COL25A1-202ENST00000399127 SH2D1AO60880 128 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 IGHG2P01859 326 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 IGF1P05019 195 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 ZNF80P51504 273 aaPredicted RBP9.03□□□□□ -0.96
COL25A1-202ENST00000399127 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 OR2K2Q8NGT1 345 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 A0A096LNT2 108 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 FAM181BA6NEQ2 426 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 FAM223BA6NKX1 122 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 IGHV4-59P01825 116 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
COL25A1-202ENST00000399127 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
COL25A1-202ENST00000399127 FAM223AQ8IWN6 122 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 NAA38Q9BRA0 125 aaKnown RBP9.03□□□□□ -0.96
COL25A1-202ENST00000399127 CCDC168Q8NDH2 2452 aa9.03□□□□□ -0.96
COL25A1-202ENST00000399127 MYO9AB2RTY4 2548 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 TRBV7-9A0A0J9YWB2 115 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 A0A1B0GUT8 65 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 C9orf118A6NHY6 69 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 H3BUT2 72 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 LRRC75A-AS1Q8N1F1 130 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 FAM110AQ9BQ89 295 aa9.02□□□□□ -0.96
COL25A1-202ENST00000399127 OR11H12B2RN74 326 aa9.02□□□□□ -0.97
COL25A1-202ENST00000399127 CRIP2P52943 208 aaPredicted RBP9.02□□□□□ -0.97
COL25A1-202ENST00000399127 HIST1H1AQ02539 215 aaPredicted RBP9.02□□□□□ -0.97
COL25A1-202ENST00000399127 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms