RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C8orf49Q96NF6 230 aa8.95□□□□□ -0.98
HLA-DQB1-203ENST00000399082 NEU1Q99519 415 aa8.95□□□□□ -0.98
HLA-DQB1-203ENST00000399082 IGHV3OR16-12A0A075B7B8 117 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TRAV12-3A0A0B4J271 114 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 ZNF80P51504 273 aaPredicted RBP8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 MEF2BQ02080 365 aaPredicted RBP8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 PRNTQ86SH4 94 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 C20orf144Q9BQM9 153 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 DERL1Q9BUN8 251 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 VAX2Q9UIW0 290 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 GOLT1BQ9Y3E0 138 aa8.94□□□□□ -0.98
HLA-DQB1-203ENST00000399082 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TRBV6-1A0A0K0K1D8 114 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 ZNF705GA8MUZ8 300 aaPredicted RBP8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 K7EQM0 130 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 DEFB4AO15263 64 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 IFNA1P01562 189 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 GPX1P07203 203 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 MIFP14174 115 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 AZU1P20160 251 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 RNASE4P34096 147 aaKnown RBP8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TMEM183BQ1AE95 376 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 ZNF506Q5JVG8 444 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 Q6AWC8 147 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TXNDC17Q9BRA2 123 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TREM1Q9NP99 234 aa8.93□□□□□ -0.98
HLA-DQB1-203ENST00000399082 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 RBFOX3A6NFN3 312 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 LTAP01374 205 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 AKR1C3P42330 323 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TOR2AQ5JU69 321 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TMEM256Q8N2U0 113 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 FMC1Q96HJ9 113 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 FAM210AQ96ND0 272 aa8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 C11orf68Q9H3H3 251 aaKnown RBP8.92□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TRBV20OR9-2A0A075B6H5 130 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 SMIM9A6NGZ8 99 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 FBLL1A6NHQ2 334 aaKnown RBP8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 H7BYZ3 331 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TAS2R60P59551 318 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 COX8CQ7Z4L0 72 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 LINC01587Q99440 93 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TMEM208Q9BTX3 173 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
HLA-DQB1-203ENST00000399082 PDE6DO43924 150 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TAGLN2P37802 199 aaKnown RBP8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 RPL35P42766 123 aaKnown RBP8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 CRIP1P50238 77 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 UBE2G1P62253 170 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 ZNF767PQ75MW2 155 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 RNASE8Q8TDE3 154 aaKnown RBP8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 ZC2HC1AQ96GY0 325 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 NIPSNAP3BQ9BS92 247 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 NDFIP1Q9BT67 221 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 MLST8Q9BVC4 326 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TP53TG3Q9ULZ0 132 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 CELA1Q9UNI1 258 aa8.9□□□□□ -0.98
HLA-DQB1-203ENST00000399082 C9JQL5 133 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 GCGP01275 180 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 IGLV2-8P01709 118 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 SRSF3P84103 164 aaKnown RBP8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 RRN3P1Q2M238 152 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 SMUG1Q53HV7 270 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 NHLRC2Q8NBF2 726 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 C11orf72Q8NBR9 251 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 ZFP30Q9Y2G7 519 aa8.89□□□□□ -0.99
HLA-DQB1-203ENST00000399082 IGHV1OR15-1A0A075B7D0 117 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 TRAV21A0A0B4J279 112 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 RAB19A4D1S5 217 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 SRP19P09132 144 aaKnown RBP8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 HTN1P15515 57 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 CLLU1Q5K131 121 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 MUC21Q5SSG8 566 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 TMEM183AQ8IXX5 376 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 IL17DQ8TAD2 202 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 MED9Q9NWA0 146 aa8.88□□□□□ -0.99
HLA-DQB1-203ENST00000399082 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 S100A9P06702 114 aaKnown RBP8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 PFN1P07737 140 aaKnown RBP8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 ANXA2RQ3ZCQ2 193 aa8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 CENPWQ5EE01 88 aa8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 ZNF575Q86XF7 245 aa8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 BAGE2Q86Y30 109 aa8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 EIF4E3Q8N5X7 224 aaKnown RBP8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 TMEM263Q8WUH6 116 aaKnown RBP8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 EIF5A2Q9GZV4 153 aaKnown RBP8.87□□□□□ -0.99
HLA-DQB1-203ENST00000399082 PGPEP1LA6NFU8 196 aa8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 RGS13O14921 159 aa8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 NDUFS6O75380 124 aaKnown RBP8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 EMP1P54849 157 aa8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 ZNF674Q2M3X9 581 aa8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 TDRG1Q3Y452 100 aa8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 C16orf74Q96GX8 76 aa8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 WWC2-AS2Q96NR7 200 aa8.86□□□□□ -0.99
HLA-DQB1-203ENST00000399082 PARLQ9H300 379 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms