RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TRAV9-1A0A075B6T8 112 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 EDDM3BP56851 147 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 GTSCR1Q86UQ5 136 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 PRO0461Q9UI25 63 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 F11RQ9Y624 299 aaKnown RBP5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 DOCK10Q96BY6 2186 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 ZNF503-AS2A6NEH8 195 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 A8MWL6 223 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 C12orf77C9JDV5 145 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 PLA2G2AP14555 144 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 SUB1P53999 127 aaKnown RBP eCLIP5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 ZNF493Q6ZR52 646 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 KCNS1Q96KK3 526 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 FAM19A4Q96LR4 140 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 TNFRSF19Q9NS68 423 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 A8MWV9 139 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 SNURFLB1AK76 121 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 GTSF1Q8WW33 167 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 MRPL18Q9H0U6 180 aaKnown RBP5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 C17orf98A8MV24 154 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 LINC00310P59036 64 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 EBI3Q14213 229 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 SPATA3Q8NHX4 192 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 LINC00479Q96M42 142 aa5.19□□□□□ -1.58
TM9SF4-202ENST00000398022 RRHO14718 337 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 RPL30P62888 115 aaKnown RBP5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 ZNF843Q8N446 348 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 CHCHD5Q9BSY4 110 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 TP53TG3Q9ULZ0 132 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 RNF114Q9Y508 228 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 IQCF6A8MYZ5 107 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 GNB1P62873 340 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 SPINK9Q5DT21 86 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 ZC2HC1BQ5TFG8 222 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 LY6G5BQ8NDX9 201 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 OR2T6Q8NHC8 308 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 SCRT2Q9NQ03 307 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 IGHV3-64DA0A0J9YX35 117 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 PMS2P5A8MQ11 134 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 MRPS12O15235 138 aaKnown RBP5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 IGHG2P01859 326 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 P0C879 139 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 COX7CP15954 63 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 BEAN1Q3B7T3 259 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 RBM12B-AS1Q9P1G2 102 aa5.18□□□□□ -1.58
TM9SF4-202ENST00000398022 ARHGAP21Q5T5U3 1957 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 TRAV12-2A0A075B6T6 113 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 PAX4O43316 350 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 ZNF324O75467 553 aaPredicted RBP5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 ARL14EPLP0DKL9 152 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 PRR15Q8IV56 129 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 LINC01356Q8N9X3 169 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 SHANK2-AS3Q9BTD1 123 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 ECSCRQ19T08 205 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 PTPN13Q12923 2485 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 PLAC8L1A1L4L8 177 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 C15orf62A8K5M9 175 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 PSPNO60542 156 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 AVPP01185 164 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 COX8CQ7Z4L0 72 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 WDR86Q86TI4 376 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 TEN1Q86WV5 123 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 OR8B3Q8NGG8 313 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 FANCD2OSQ96PS1 177 aa5.17□□□□□ -1.58
TM9SF4-202ENST00000398022 TRGV5A0A0B4J1U4 118 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 IGHV3-43A0A0B4J1X8 118 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 SPINK4O60575 86 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 PRB1P04280 392 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 IGHV3-43DP0DP04 118 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 RFESDQ8TAC1 157 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 IL36BQ9NZH7 164 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 DEFB108AA8MXU0 73 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 CSN1S1P47710 185 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 CLEC7AQ9BXN2 247 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 DEFB127Q9H1M4 99 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 E9PLD3 99 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 UBE2G1P62253 170 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 MIC13Q5XKP0 118 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 KLF14Q8TD94 323 aaPredicted RBP5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 IMUPQ9GZP8 106 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 PLEKHA3Q9HB20 300 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 TMEM167BQ9NRX6 74 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 LY96Q9Y6Y9 160 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 ADGRG4Q8IZF6 3080 aa5.16□□□□□ -1.58
TM9SF4-202ENST00000398022 SMIM26A0A096LP01 95 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 COX8AP10176 69 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 DEFA4P12838 97 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 NPPCP23582 126 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 GCHFRP30047 84 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 TREML4Q6UXN2 200 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 ZNF826PQ6ZT77 177 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 GTF3C1Q12789 2109 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 ANK2Q01484 3957 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 TRBV19A0A075B6N1 114 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 SCO2A0A1W2PP80 73 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 LINC00473A8K010 186 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 C9JCJ5 164 aa5.15□□□□□ -1.58
TM9SF4-202ENST00000398022 C8orf87E5RJ46 101 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms