RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ROS1P08922 2347 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 ZC2HC1BQ5TFG8 222 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 GNRH2O43555 120 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 SPRY2O43597 315 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 C1orf194Q5T5A4 169 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 DOPEY2Q9Y3R5 2298 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 WNK2Q9Y3S1 2297 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 STPG4Q8N801 248 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 EDA2RQ9HAV5 297 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 H3BMM0 161 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 C2orf66Q6UXQ4 117 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 TMEM190Q8WZ59 177 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 UBE2WQ96B02 151 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 GFRA4Q9GZZ7 299 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 HEATR5AQ86XA9 2040 aa8.97□□□□□ -0.97
TTC28-201ENST00000397906 SYS1-DBNDD2H3BUS1 97 aa8.96□□□□□ -0.97
TTC28-201ENST00000397906 PRR25Q96S07 402 aa8.96□□□□□ -0.97
TTC28-201ENST00000397906 F8W735 103 aaPredicted RBP8.96□□□□□ -0.97
TTC28-201ENST00000397906 PRSS46E5RG02 174 aa8.96□□□□□ -0.97
TTC28-201ENST00000397906 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.98
TTC28-201ENST00000397906 U3KQE9 123 aa8.96□□□□□ -0.98
TTC28-201ENST00000397906 LINC00311Q8N616 119 aa8.96□□□□□ -0.98
TTC28-201ENST00000397906 RITA1Q96K30 269 aa8.96□□□□□ -0.98
TTC28-201ENST00000397906 FOXI2Q6ZQN5 318 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 ZC2HC1AQ96GY0 325 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 ZGRF1Q86YA3 2104 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 C2orf16Q68DN1 1984 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 ETV2O00321 342 aaPredicted RBP8.95□□□□□ -0.98
TTC28-201ENST00000397906 ARTNQ5T4W7 220 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 IGHV3-30P01768 117 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 IGHV3-33P01772 117 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 IGHV3-30-3P0DP02 117 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 IGHV3-30-5P0DP03 117 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 C3orf79P0CE67 100 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 LINC01559Q495D7 138 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 C10orf105Q8TEF2 133 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 PRSS57Q6UWY2 283 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 DYNAPQ8N1N2 210 aa8.95□□□□□ -0.98
TTC28-201ENST00000397906 MRPL53Q96EL3 112 aaKnown RBP8.95□□□□□ -0.98
TTC28-201ENST00000397906 DENND4CQ5VZ89 1909 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 DEFB105AQ8NG35 78 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 IGHV4-4A0A075B6R2 117 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 GAGE2EQ4V326 116 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 GAGE2DQ9UEU5 116 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.94□□□□□ -0.98
TTC28-201ENST00000397906 IGKV2-29A2NJV5 120 aaPredicted RBP8.94□□□□□ -0.98
TTC28-201ENST00000397906 PLA2G5P39877 138 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 MRPL51Q4U2R6 128 aaKnown RBP8.94□□□□□ -0.98
TTC28-201ENST00000397906 RSPO1Q2MKA7 263 aaPredicted RBP8.94□□□□□ -0.98
TTC28-201ENST00000397906 OCIAD2Q56VL3 154 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 KAAG1Q9UBP8 84 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 FOXE3Q13461 319 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 LY96Q9Y6Y9 160 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 DOCK10Q96BY6 2186 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 HIST2H2BCQ6DN03 193 aa8.94□□□□□ -0.98
TTC28-201ENST00000397906 TRBV24-1A0A075B6N3 115 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 IGHV1-24A0A0C4DH33 117 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 SCRT2Q9NQ03 307 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 TMEM141Q96I45 108 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 IGHV4OR15-8A0A075B7B6 117 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 A0A087WW49 117 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 RHOHQ15669 191 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 AJUBAQ96IF1 538 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 A0A1W2PNU3 283 aaPredicted RBP8.93□□□□□ -0.98
TTC28-201ENST00000397906 IGLC1P0CG04 106 aa8.93□□□□□ -0.98
TTC28-201ENST00000397906 GPR179Q6PRD1 2367 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 TAL2Q16559 108 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 FAM104BQ5XKR9 115 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 CCL18P55774 89 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 DEFB135Q30KP9 77 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 VOPP1Q96AW1 172 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 GYPEP15421 78 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 DNAJC30Q96LL9 226 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 IGFL2Q6UWQ7 119 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 C1orf43Q9BWL3 253 aa8.92□□□□□ -0.98
TTC28-201ENST00000397906 A0A1B0GW64 132 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 Q8N8P6 123 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 OVOL2Q9BRP0 275 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 C9JAW5 83 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 OR11H6Q8NGC7 330 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 ZNF491Q8N8L2 437 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 CFHR4Q92496 578 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 MPV17L2Q567V2 206 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 RBMY1FQ15415 496 aaKnown RBP8.91□□□□□ -0.98
TTC28-201ENST00000397906 MTURNQ8N3F0 131 aa8.91□□□□□ -0.98
TTC28-201ENST00000397906 H3BUA1 57 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 NDUFS5O43920 106 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 COLCA2A8K830 154 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 UBE2CO00762 179 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 C11orf53Q8IXP5 236 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 TMEM14CQ9P0S9 112 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 CRLF1O75462 422 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 KIR3DS1Q14943 382 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 CITED2Q99967 270 aaPredicted RBP8.9□□□□□ -0.98
TTC28-201ENST00000397906 IGF2-ASQ6U949 168 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 NCOR1P1Q9H4R4 102 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 ICOSQ9Y6W8 199 aa8.9□□□□□ -0.98
TTC28-201ENST00000397906 FXYD5Q96DB9 178 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms