RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 DPH3P1Q9H4G8 78 aa6.36□□□□□ -1.39
PTPRD-204ENST00000397606 CD300EQ496F6 205 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-204ENST00000397606 SHISA2Q6UWI4 295 aa6.36□□□□□ -1.39
PTPRD-204ENST00000397606 NUP35Q8NFH5 326 aa6.36□□□□□ -1.39
PTPRD-204ENST00000397606 PRADC1Q9BSG0 188 aa6.36□□□□□ -1.39
PTPRD-204ENST00000397606 TCAPO15273 167 aa6.36□□□□□ -1.39
PTPRD-204ENST00000397606 F6UB75 175 aa6.36□□□□□ -1.39
PTPRD-204ENST00000397606 APOHP02749 345 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-204ENST00000397606 TMEM101Q96IK0 257 aa6.36□□□□□ -1.39
PTPRD-204ENST00000397606 ZNF256Q9Y2P7 627 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-204ENST00000397606 TRAV12-2A0A075B6T6 113 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 TMEM262E9PQX1 116 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 ADCYAP1P18509 176 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 SRSF1Q07955 248 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPRD-204ENST00000397606 ZNF876PQ49A33 203 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 WIPF2Q8TF74 440 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-204ENST00000397606 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
PTPRD-204ENST00000397606 A0A087X0K7 114 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 NDUFA7O95182 113 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 LTAP01374 205 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 TMEM61Q8N0U2 210 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 TMEM256Q8N2U0 113 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 RHODO00212 210 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 C19orf54Q5BKX5 351 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 MORN3Q6PF18 240 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-204ENST00000397606 KLK9Q9UKQ9 250 aa6.35□□□□□ -1.39
PTPRD-204ENST00000397606 IGLC2P0DOY2 106 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 OR2K2Q8NGT1 345 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 RPL36AP83881 106 aaKnown RBP6.34□□□□□ -1.39
PTPRD-204ENST00000397606 ANXA2RQ3ZCQ2 193 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 TMEM97Q5BJF2 176 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 RPL36ALQ969Q0 106 aaKnown RBP6.34□□□□□ -1.39
PTPRD-204ENST00000397606 ZC2HC1AQ96GY0 325 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 MTORP42345 2549 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-204ENST00000397606 C10orf99Q6UWK7 81 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 Q6ZS46 218 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 APRG1Q8IVJ8 170 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 RNF152Q8N8N0 203 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 C12orf57Q99622 126 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 PYGO2Q9BRQ0 406 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 PLA2G2EQ9NZK7 142 aa6.34□□□□□ -1.39
PTPRD-204ENST00000397606 ATP5LO75964 103 aa6.34□□□□□ -1.4
PTPRD-204ENST00000397606 DEFB130BP0DP73 79 aa6.34□□□□□ -1.4
PTPRD-204ENST00000397606 DEFB130AP0DP74 79 aa6.34□□□□□ -1.4
PTPRD-204ENST00000397606 C14orf178Q8N769 122 aaPredicted RBP6.34□□□□□ -1.4
PTPRD-204ENST00000397606 CRIP2P52943 208 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-204ENST00000397606 DEFA6Q01524 100 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 HCFC1P51610 2035 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 COTL1Q14019 142 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 SPXQ9BT56 116 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 HECTD1Q9ULT8 2610 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 ORMDL2Q53FV1 153 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 COL6A3P12111 3177 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 LINC01549A6NIU2 74 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 PIFOQ8TCI5 191 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 C1orf159Q96HA4 380 aa6.33□□□□□ -1.4
PTPRD-204ENST00000397606 LOC102724200A0A096LPH7 203 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-204ENST00000397606 A8MWV9 139 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 SCGB3A1Q96QR1 104 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 ZFAND3Q9H8U3 227 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 IGHV3-53P01767 116 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 CXCL1P09341 107 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 XIRP2A4UGR9 3374 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 DAD1P61803 113 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-204ENST00000397606 GEMIN7Q9H840 131 aaKnown RBP6.32□□□□□ -1.4
PTPRD-204ENST00000397606 ZMAT4Q9H898 229 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 IGHV3-73A0A0B4J1V6 119 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 TMEM213A2RRL7 107 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 COLCA2A8K830 154 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 D6R8Y8 96 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 C9orf47Q6ZRZ4 202 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 DMRT1Q9Y5R6 373 aa6.32□□□□□ -1.4
PTPRD-204ENST00000397606 USP24Q9UPU5 2620 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 C2orf88Q9BSF0 95 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 V9GYV3 84 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 ACANP16112 2415 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 LINC00614P0C842 121 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 SCGB1D4Q6XE38 83 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 CSTL1Q9H114 145 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 CYSLTR1Q9Y271 337 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 SETD2Q9BYW2 2564 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-204ENST00000397606 A0A087WWL8 130 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 AZU1P20160 251 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 EVI2AP22794 236 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-204ENST00000397606 KLF5Q13887 457 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-204ENST00000397606 DEFB114Q30KQ6 69 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 C10orf91Q5T1B1 145 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 LAMTOR2Q9Y2Q5 125 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 IGKV3OR2-268A0A0C4DH90 116 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-204ENST00000397606 BRI3O95415 125 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 SMIM6P0DI80 62 aa6.31□□□□□ -1.4
PTPRD-204ENST00000397606 SRSF2Q01130 221 aaKnown RBP6.31□□□□□ -1.4
PTPRD-204ENST00000397606 KLF12Q9Y4X4 402 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms