RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 SAMD5Q5TGI4 173 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 Q8N6K4 173 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 M0R1W7 72 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 S100A7P31151 101 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 KLK9Q2XQG4 91 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 Q8N8P6 123 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 C18orf15Q96N68 181 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
TRIM40-207ENST00000396581 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 KLK9Q9UKQ9 250 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 SCGB2A1O75556 95 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 HLA-DMBP28068 263 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 EBI3Q14213 229 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 WFDC3Q8IUB2 231 aa10.29□□□□□ -0.76
TRIM40-207ENST00000396581 AKAP6Q13023 2319 aa10.28□□□□□ -0.76
TRIM40-207ENST00000396581 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
TRIM40-207ENST00000396581 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
TRIM40-207ENST00000396581 ORM1P02763 201 aa10.28□□□□□ -0.76
TRIM40-207ENST00000396581 RIPPLY3P57055 190 aa10.28□□□□□ -0.76
TRIM40-207ENST00000396581 DYNAPQ8N1N2 210 aa10.28□□□□□ -0.76
TRIM40-207ENST00000396581 PRTN3P24158 256 aa10.27□□□□□ -0.76
TRIM40-207ENST00000396581 A0A1W2PRD5 423 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 A0A1W2PRF3 423 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 A0A1W2PRM7 423 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 LY6HO94772 140 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 DPM2O94777 84 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 GCSHP23434 173 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 RAB9AP51151 201 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 IL17RELQ6ZVW7 336 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 TMEM158Q8WZ71 300 aa10.27□□□□□ -0.77
TRIM40-207ENST00000396581 OOSP1A8MZH6 123 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 PRB1P04280 392 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 PRSS1P07477 247 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 TAL2Q16559 108 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 IGFL4Q6B9Z1 124 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 CEND1Q8N111 149 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 IGKV3D-20A0A0C4DH25 116 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 HES1Q14469 280 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 TIMD4Q96H15 378 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
TRIM40-207ENST00000396581 IGHV4-4A0A075B6R2 117 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 PRAC2D3DTV9 90 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 E9PLD3 99 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 BUB3O43684 328 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 GOSR1O95249 250 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 IGHV3-23P01764 117 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 GATA1P15976 413 aaPredicted RBP10.25□□□□□ -0.77
TRIM40-207ENST00000396581 ERCC8Q13216 396 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 KLRD1Q13241 179 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 TM4SF20Q53R12 229 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 CCDC144NLQ6NUI1 221 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 ZNF843Q8N446 348 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 NRACQ8N912 160 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 FOXC2Q99958 501 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 SLC50A1Q9BRV3 221 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 SELENOKQ9Y6D0 94 aa10.25□□□□□ -0.77
TRIM40-207ENST00000396581 IGHV7-81A0A0B4J1V7 117 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 UBTD1Q9HAC8 227 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 IGHV7-4-1A0A0J9YVY3 117 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 C1orf122Q6ZSJ8 110 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 GTSCR1Q86UQ5 136 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 ZNF502Q8TBZ5 544 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 LRRK2Q5S007 2527 aa10.24□□□□□ -0.77
TRIM40-207ENST00000396581 MRPL53Q96EL3 112 aaKnown RBP10.23□□□□□ -0.77
TRIM40-207ENST00000396581 C11orf21Q9P2W6 132 aa10.23□□□□□ -0.77
TRIM40-207ENST00000396581 A0A087WX48 190 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 TRAV40A0A0B4J280 105 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 LINC01619G3V211 115 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 LAGE3Q14657 143 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 MINOS1Q5TGZ0 78 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 AGPAT4-IT1Q9H0P7 198 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 MINOS1-NBL1R4GNA1 71 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 CLPSL1A2RUU4 121 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 K7ERJ3 54 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 TRGV3P03979 118 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 EFNA4P52798 201 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 VMO1Q7Z5L0 202 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 FAM110DQ8TAY7 271 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-207ENST00000396581 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 MRPL35Q9NZE8 188 aaKnown RBP10.22□□□□□ -0.77
TRIM40-207ENST00000396581 FAM208BQ5VWN6 2430 aa10.22□□□□□ -0.77
TRIM40-207ENST00000396581 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 NCBP2LA6PVI3 153 aaKnown RBP10.21□□□□□ -0.77
TRIM40-207ENST00000396581 IGLL5B9A064 214 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 F8W1H4 67 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 PPIFP30405 207 aaKnown RBP10.21□□□□□ -0.77
TRIM40-207ENST00000396581 FOXI2Q6ZQN5 318 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 Q8N9W7 124 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 MYOZ3Q8TDC0 251 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 SPOCK3Q9BQ16 436 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 NHP2Q9NX24 153 aaKnown RBP10.21□□□□□ -0.77
TRIM40-207ENST00000396581 SPG11Q96JI7 2443 aa10.21□□□□□ -0.77
TRIM40-207ENST00000396581 UBR5O95071 2799 aaPredicted RBP10.21□□□□□ -0.78
TRIM40-207ENST00000396581 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.78
TRIM40-207ENST00000396581 TMEM160Q9NX00 188 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms