RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 TMEM155Q4W5P6 130 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 CCDC144NLQ6NUI1 221 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 GFRALQ6UXV0 394 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 RNF182Q8N6D2 247 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 MYOZ3Q8TDC0 251 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 SPANXB1Q9NS25 103 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-203ENST00000396547 U3KQK5 164 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 LOC107984156A0A0G2JMH3 177 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 A0A1B0GV72 72 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 PRRG2O14669 202 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 CEACAM3P40198 252 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 ARL17AQ8IVW1 177 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 BUB1B-PAK6H3BSN5 160 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 FOXI2Q6ZQN5 318 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 ZNF418Q8TF45 676 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-203ENST00000396547 ATP6V0BQ99437 205 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 C20orf78Q9BR46 151 aa7.67□□□□□ -1.18
TRIM39-203ENST00000396547 PRAC2D3DTV9 90 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 K7EM74 188 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 TRGV3P03979 118 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 CRYBA4P53673 196 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 TTC9CQ8N5M4 171 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 LINC00311Q8N616 119 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 RNF185Q96GF1 192 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 TRAV26-1A0A087WT03 109 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 Q6ZQT7 251 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 DTX2Q86UW9 622 aa7.66□□□□□ -1.18
TRIM39-203ENST00000396547 LY6HO94772 140 aa7.65□□□□□ -1.18
TRIM39-203ENST00000396547 CRYGBP07316 175 aa7.65□□□□□ -1.18
TRIM39-203ENST00000396547 DLX6P56179 175 aa7.65□□□□□ -1.18
TRIM39-203ENST00000396547 PAX8Q06710 450 aa7.65□□□□□ -1.18
TRIM39-203ENST00000396547 PHLDA1Q8WV24 401 aaPredicted RBP7.65□□□□□ -1.18
TRIM39-203ENST00000396547 TLN1Q9Y490 2541 aaKnown RBP7.65□□□□□ -1.19
TRIM39-203ENST00000396547 IGSF10Q6WRI0 2623 aa7.65□□□□□ -1.19
TRIM39-203ENST00000396547 E9PLD3 99 aa7.65□□□□□ -1.19
TRIM39-203ENST00000396547 KLRD1Q13241 179 aa7.65□□□□□ -1.19
TRIM39-203ENST00000396547 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.19
TRIM39-203ENST00000396547 ASH1LQ9NR48 2969 aaKnown RBP7.64□□□□□ -1.19
TRIM39-203ENST00000396547 FABP5P3A8MUU1 101 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 F8W1H4 67 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 APOMO95445 188 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 PSMB2P49721 201 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 MFAP4P55083 255 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 PVRIGQ6DKI7 326 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 IL17RELQ6ZVW7 336 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 DYNAPQ8N1N2 210 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 RNASE6Q93091 150 aaKnown RBP7.64□□□□□ -1.19
TRIM39-203ENST00000396547 PTH2Q96A98 100 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 NXT2Q9NPJ8 142 aaKnown RBP7.64□□□□□ -1.19
TRIM39-203ENST00000396547 SMPXQ9UHP9 88 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 RALYQ9UKM9 306 aaKnown RBP7.64□□□□□ -1.19
TRIM39-203ENST00000396547 LY6DQ14210 128 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 HIF1ANQ9NWT6 349 aa7.64□□□□□ -1.19
TRIM39-203ENST00000396547 MRPS12O15235 138 aaKnown RBP7.63□□□□□ -1.19
TRIM39-203ENST00000396547 CFHR4Q92496 578 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 MRPL16Q9NX20 251 aaKnown RBP7.63□□□□□ -1.19
TRIM39-203ENST00000396547 TRBV6-1A0A0K0K1D8 114 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 H3BVH4 76 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 EMP1P54849 157 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 SRSF9Q13242 221 aaKnown RBP eCLIP7.63□□□□□ -1.19
TRIM39-203ENST00000396547 SPANXN1Q5VSR9 72 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 SCGB1D4Q6XE38 83 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 SYT8Q8NBV8 401 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 GLMPQ8WWB7 406 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 VKORC1Q9BQB6 163 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 PGPEP1Q9NXJ5 209 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 C21orf62Q9NYP8 219 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 IGLV1-47P01700 117 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 RPL7P18124 248 aaKnown RBP7.63□□□□□ -1.19
TRIM39-203ENST00000396547 HIGD1BQ9P298 99 aa7.63□□□□□ -1.19
TRIM39-203ENST00000396547 J3QKU1 62 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 ATP5LO75964 103 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 ZNF502Q8TBZ5 544 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 TM2D2Q9BX73 214 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 OR11H12B2RN74 326 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 HOXA3O43365 443 aaPredicted RBP7.62□□□□□ -1.19
TRIM39-203ENST00000396547 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 OR11H1Q8NG94 326 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 OR11H2Q8NH07 326 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 COL6A6A6NMZ7 2263 aa7.62□□□□□ -1.19
TRIM39-203ENST00000396547 NBR2O15453 112 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 HLA-DRB4P13762 266 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 LAGE3Q14657 143 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 RRN3P1Q2M238 152 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 GEMIN7Q9H840 131 aaKnown RBP7.61□□□□□ -1.19
TRIM39-203ENST00000396547 SMAD5-AS1Q9Y6J3 95 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 HLA-DRB4X5D2U9 266 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 EPG5Q9HCE0 2579 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 FAM208BQ5VWN6 2430 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 A0A0G2JNJ9 132 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 LINC01549A6NIU2 74 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 M0R381 172 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 THBDP07204 575 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 NUP37Q8NFH4 326 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 Q9UFV3 132 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 SPINK8P0C7L1 97 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 Q8N8P6 123 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms