RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 WNK1Q9H4A3 2382 aa12.89□□□□□ -0.35
HOXA10-202ENST00000396344 SERF1AO75920 110 aa12.88□□□□□ -0.35
HOXA10-202ENST00000396344 SLAQ13239 276 aa12.88□□□□□ -0.35
HOXA10-202ENST00000396344 IQCJQ1A5X6 159 aa12.88□□□□□ -0.35
HOXA10-202ENST00000396344 WFDC12Q8WWY7 111 aa12.88□□□□□ -0.35
HOXA10-202ENST00000396344 ZNF702PQ9H963 129 aa12.88□□□□□ -0.35
HOXA10-202ENST00000396344 NRN1Q9NPD7 142 aa12.88□□□□□ -0.35
HOXA10-202ENST00000396344 PKD1L1Q8TDX9 2849 aa12.88□□□□□ -0.35
HOXA10-202ENST00000396344 PCP4L1A6NKN8 68 aa12.87□□□□□ -0.35
HOXA10-202ENST00000396344 LGALS1P09382 135 aaKnown RBP12.87□□□□□ -0.35
HOXA10-202ENST00000396344 HLA-DMBP28068 263 aa12.87□□□□□ -0.35
HOXA10-202ENST00000396344 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
HOXA10-202ENST00000396344 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
HOXA10-202ENST00000396344 RNF152Q8N8N0 203 aa12.87□□□□□ -0.35
HOXA10-202ENST00000396344 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
HOXA10-202ENST00000396344 VGLL1Q99990 258 aa12.87□□□□□ -0.35
HOXA10-202ENST00000396344 IGHV3OR16-13A0A075B7E8 117 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 IGHV3-49A0A0A0MS15 119 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 IGHV3-74A0A0B4J1X5 117 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 ID1P41134 155 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 CRIP1P50238 77 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 Q8N2B8 174 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 LINC01006Q8NI28 216 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 LINC00477Q96M19 166 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
HOXA10-202ENST00000396344 TMEM95Q3KNT9 176 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 KIAA1644Q3SXP7 199 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 Q6ZSV7 163 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 Q8TAT8 98 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 MYOZ3Q8TDC0 251 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 UBE2E2Q96LR5 201 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 SMPXQ9UHP9 88 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 RNF114Q9Y508 228 aa12.86□□□□□ -0.35
HOXA10-202ENST00000396344 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
HOXA10-202ENST00000396344 CTRLP40313 264 aa12.85□□□□□ -0.35
HOXA10-202ENST00000396344 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
HOXA10-202ENST00000396344 C18orf32Q8TCD1 76 aa12.85□□□□□ -0.35
HOXA10-202ENST00000396344 ALKBH7Q9BT30 221 aaPredicted RBP12.85□□□□□ -0.35
HOXA10-202ENST00000396344 TP53TG3Q9ULZ0 132 aa12.85□□□□□ -0.35
HOXA10-202ENST00000396344 LGALS9O00182 355 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 GZMBP10144 247 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 RAB4AP20338 218 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 PROK1P58294 105 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 CITED1Q99966 193 aa12.84□□□□□ -0.35
HOXA10-202ENST00000396344 F2Z2F3 143 aa12.83□□□□□ -0.36
HOXA10-202ENST00000396344 LOC102724200A0A096LPH7 203 aaPredicted RBP12.82□□□□□ -0.36
HOXA10-202ENST00000396344 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
HOXA10-202ENST00000396344 M0QZ24 198 aa12.82□□□□□ -0.36
HOXA10-202ENST00000396344 SOCS3O14543 225 aa12.82□□□□□ -0.36
HOXA10-202ENST00000396344 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
HOXA10-202ENST00000396344 ARMS2P0C7Q2 107 aa12.82□□□□□ -0.36
HOXA10-202ENST00000396344 RPL11P62913 178 aaKnown RBP12.82□□□□□ -0.36
HOXA10-202ENST00000396344 ZNF493Q6ZR52 646 aa12.82□□□□□ -0.36
HOXA10-202ENST00000396344 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
HOXA10-202ENST00000396344 TSTD3H0UI37 97 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 HSBP1O75506 76 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 ORM1P02763 201 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 AMTP48728 403 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 ERCC8Q13216 396 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 CHCHD1Q96BP2 118 aaKnown RBP12.81□□□□□ -0.36
HOXA10-202ENST00000396344 TPPP3Q9BW30 176 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 SSBP4Q9BWG4 385 aaPredicted RBP12.81□□□□□ -0.36
HOXA10-202ENST00000396344 GSN-AS1Q9NRJ2 163 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 TRRAPQ9Y4A5 3859 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 RPLP1P05386 114 aaKnown RBP12.81□□□□□ -0.36
HOXA10-202ENST00000396344 GPX1P07203 203 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 PMCHP20382 165 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 LCNL1Q6ZST4 164 aa12.81□□□□□ -0.36
HOXA10-202ENST00000396344 IGLC6P0CF74 106 aa12.8□□□□□ -0.36
HOXA10-202ENST00000396344 LINC00310P59036 64 aa12.8□□□□□ -0.36
HOXA10-202ENST00000396344 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
HOXA10-202ENST00000396344 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
HOXA10-202ENST00000396344 PKIAP61925 76 aa12.79□□□□□ -0.36
HOXA10-202ENST00000396344 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
HOXA10-202ENST00000396344 TMSB15BA0A087X1C1 80 aa12.78□□□□□ -0.36
HOXA10-202ENST00000396344 NUPR1O60356 82 aa12.78□□□□□ -0.36
HOXA10-202ENST00000396344 SCGB1D1O95968 90 aa12.78□□□□□ -0.36
HOXA10-202ENST00000396344 ZNF80P51504 273 aaPredicted RBP12.78□□□□□ -0.36
HOXA10-202ENST00000396344 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
HOXA10-202ENST00000396344 NAGKQ9UJ70 344 aa12.78□□□□□ -0.36
HOXA10-202ENST00000396344 TRAV21A0A0B4J279 112 aa12.77□□□□□ -0.36
HOXA10-202ENST00000396344 VWFP04275 2813 aa12.77□□□□□ -0.37
HOXA10-202ENST00000396344 KRTAP10-3P60369 221 aa12.77□□□□□ -0.37
HOXA10-202ENST00000396344 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.37
HOXA10-202ENST00000396344 CACNG7P62955 275 aa12.77□□□□□ -0.37
HOXA10-202ENST00000396344 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.37
HOXA10-202ENST00000396344 SMIM15Q7Z3B0 74 aa12.77□□□□□ -0.37
HOXA10-202ENST00000396344 OR8A1Q8NGG7 326 aa12.77□□□□□ -0.37
HOXA10-202ENST00000396344 RCHY1Q96PM5 261 aa12.77□□□□□ -0.37
HOXA10-202ENST00000396344 NOTCH1P46531 2555 aa12.76□□□□□ -0.37
HOXA10-202ENST00000396344 TMEM213A2RRL7 107 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms