RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 ZNF843Q8N446 348 aa12.35□□□□□ -0.43
CCHCR1-202ENST00000396263 RAB37Q96AX2 223 aa12.35□□□□□ -0.43
CCHCR1-202ENST00000396263 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
CCHCR1-202ENST00000396263 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
CCHCR1-202ENST00000396263 PAX8Q06710 450 aa12.35□□□□□ -0.43
CCHCR1-202ENST00000396263 MED13LQ71F56 2210 aa12.35□□□□□ -0.43
CCHCR1-202ENST00000396263 GTSF1LQ9H1H1 148 aa12.35□□□□□ -0.43
CCHCR1-202ENST00000396263 IGHV3OR16-8A0A075B7F1 116 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 IGHV3-35A0A0C4DH35 117 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 RBAKDNA6NC62 111 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 CLEC3BP05452 202 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 AZU1P20160 251 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 TCTAP57738 103 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 TWIST1Q15672 202 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 WFDC12Q8WWY7 111 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 SAA4P35542 130 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 EFNA4P52798 201 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 DPF1Q92782 380 aa12.34□□□□□ -0.43
CCHCR1-202ENST00000396263 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 SLC50A1Q9BRV3 221 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 CLPSL1A2RUU4 121 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 CKS2P33552 79 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 SMAGPQ0VAQ4 97 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 LGALS9BQ3B8N2 356 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 LGALS9CQ6DKI2 356 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 SPCS1Q9Y6A9 102 aa12.33□□□□□ -0.44
CCHCR1-202ENST00000396263 A6NDN8 102 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 HBDP02042 147 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 UBTD1Q9HAC8 227 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 UTP20O75691 2785 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 MAP1AP78559 2803 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 CENPVL3A0A0U1RRI6 287 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 TEX48A0A1B0GUV7 120 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 PRAC2D3DTV9 90 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 NPYP01303 97 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 ORM1P02763 201 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 LMO4P61968 165 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 OR8A1Q8NGG7 326 aa12.32□□□□□ -0.44
CCHCR1-202ENST00000396263 A0A1W2PPM0 123 aa12.31□□□□□ -0.44
CCHCR1-202ENST00000396263 ERCC8Q13216 396 aa12.31□□□□□ -0.44
CCHCR1-202ENST00000396263 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
CCHCR1-202ENST00000396263 SMPXQ9UHP9 88 aa12.31□□□□□ -0.44
CCHCR1-202ENST00000396263 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-202ENST00000396263 EEF1AKMT3Q96AZ1 226 aa12.31□□□□□ -0.44
CCHCR1-202ENST00000396263 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
CCHCR1-202ENST00000396263 G3V318 75 aa12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 SMKR1H3BMG3 65 aa12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 SMIM17P0DL12 118 aa12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 CLEC19AQ6UXS0 136 aa12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 BPESC1Q9GZL8 116 aa12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 RNF182Q8N6D2 247 aa12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 UBR5O95071 2799 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-202ENST00000396263 LINC01546A6NGU7 62 aa12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 LINC01548A6NM66 108 aa12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 NPFFO15130 113 aa12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 IL17RELQ6ZVW7 336 aa12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 OR5A1Q8NGJ0 315 aa12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 C5orf56Q8N8D9 126 aa12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 MRPL53Q96EL3 112 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 MSRB1Q9NZV6 116 aa12.29□□□□□ -0.44
CCHCR1-202ENST00000396263 CRYBG3Q68DQ2 2970 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 ZNF207O43670 478 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 ADAMTSL5Q6ZMM2 481 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 TRAV8-2A0A0B4J237 113 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 METTL26Q96S19 204 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 U3KQE9 123 aa12.28□□□□□ -0.44
CCHCR1-202ENST00000396263 IGHV3-66A0A0C4DH42 116 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 SCGB1A1P11684 91 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 CACNG7P62955 275 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 HSD52Q0P140 79 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 SIGMAR1Q99720 223 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 AGPAT4-IT1Q9H0P7 198 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 FXYD7P58549 80 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 SRSF1Q07955 248 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 TM4SF20Q53R12 229 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 HIF1ANQ9NWT6 349 aa12.27□□□□□ -0.45
CCHCR1-202ENST00000396263 IGKV3D-20A0A0C4DH25 116 aa12.26□□□□□ -0.45
CCHCR1-202ENST00000396263 A0A1B0GV72 72 aa12.26□□□□□ -0.45
CCHCR1-202ENST00000396263 C8orf86Q6ZUL3 223 aa12.26□□□□□ -0.45
CCHCR1-202ENST00000396263 TSSC4Q9Y5U2 329 aaPredicted RBP12.26□□□□□ -0.45
CCHCR1-202ENST00000396263 A1L4Q6 167 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 SMAD7O15105 426 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 IGHV3OR16-13A0A075B7E8 117 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 IGHV3-74A0A0B4J1X5 117 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 FABP2P12104 132 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 ATP5G2Q06055 141 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 C19orf54Q5BKX5 351 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 TMEM78Q5T7P6 136 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 C9orf47Q6ZRZ4 202 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 NXT2Q9NPJ8 142 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-202ENST00000396263 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms