RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 Q6ZS49 121 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 CYSLTR1Q9Y271 337 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 CFPP27918 469 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 IGFL2Q6UWQ7 119 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 C3orf79P0CE67 100 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 GAGE6Q13070 117 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 TRGV11A0A075B6L2 103 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 AZU1P20160 251 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 CFHR4Q92496 578 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 USMG5Q96IX5 58 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 ALKBH7Q9BT30 221 aaPredicted RBP7.17□□□□□ -1.26
CDH11-202ENST00000394156 TMEM242Q9NWH2 141 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 NAV3Q8IVL0 2385 aa7.17□□□□□ -1.26
CDH11-202ENST00000394156 NOP10Q9NPE3 64 aaKnown RBP7.17□□□□□ -1.26
CDH11-202ENST00000394156 Q6ZPA2 131 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 MRPL36Q9P0J6 103 aaKnown RBP7.16□□□□□ -1.26
CDH11-202ENST00000394156 ANAPC10Q9UM13 185 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 PRRC2CQ9Y520 2896 aaKnown RBP7.16□□□□□ -1.26
CDH11-202ENST00000394156 IGLC7A0M8Q6 106 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 LYRM7Q5U5X0 104 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 MS4A6AQ9H2W1 248 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 TRBV19A0A075B6N1 114 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 NDUFS8O00217 210 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 ATP5L2Q7Z4Y8 100 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 IGF2BP2-AS1Q96M15 143 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 Q6ZQT7 251 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 Q8N7P7 452 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 OR2K2Q8NGT1 345 aa7.16□□□□□ -1.26
CDH11-202ENST00000394156 A0A087WX48 190 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 TNFRSF6BO95407 300 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 FRMD6-AS1P0C7T7 363 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 PGPEP1Q9NXJ5 209 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 COX6CP09669 75 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 GATD1Q8NB37 220 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 IGLC1P0CG04 106 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 ZNF124Q15973 351 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 MRPL51Q4U2R6 128 aaKnown RBP7.15□□□□□ -1.26
CDH11-202ENST00000394156 A0A1B0GWB2 263 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 DNAL4O96015 105 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 INSP01308 110 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 KRTAP27-1Q3LI81 207 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 ODF3L1Q8IXM7 274 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 LAMTOR2Q9Y2Q5 125 aa7.15□□□□□ -1.26
CDH11-202ENST00000394156 KLF2Q9Y5W3 355 aaPredicted RBP7.15□□□□□ -1.26
CDH11-202ENST00000394156 CCL24O00175 119 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 PSCAO43653 123 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 C10orf99Q6UWK7 81 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 PRADC1Q9BSG0 188 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 IGHV4OR15-8A0A075B7B6 117 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 A0A087WW49 117 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 H3BRN7 92 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 ZNRF2Q8NHG8 242 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 MEGF9Q9H1U4 602 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 SPCS1Q9Y6A9 102 aa7.15□□□□□ -1.27
CDH11-202ENST00000394156 TRBV24-1A0A075B6N3 115 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 IGHV7-81A0A0B4J1V7 117 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 TSPAN13O95857 204 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 NDUFAF3Q9BU61 184 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 PRAC2D3DTV9 90 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 CKS1BP61024 79 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 TP53TG1Q9Y2A0 90 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 H3BRM9 83 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 PFN2P35080 140 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 WFDC11Q8NEX6 87 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 ATP6V0BQ99437 205 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 FREM2Q5SZK8 3169 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 ZNF491Q8N8L2 437 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 PAX2Q02962 417 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 TTC9CQ8N5M4 171 aa7.14□□□□□ -1.27
CDH11-202ENST00000394156 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
CDH11-202ENST00000394156 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
CDH11-202ENST00000394156 EGR2P11161 476 aaPredicted RBP7.13□□□□□ -1.27
CDH11-202ENST00000394156 ZNF664Q8N3J9 261 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 VWC2Q2TAL6 325 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 RPL39LQ96EH5 51 aaKnown RBP7.13□□□□□ -1.27
CDH11-202ENST00000394156 AJUBAQ96IF1 538 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 V9GYV3 84 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 Q6AWC8 147 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 C9orf139Q6ZV77 190 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 PRRC2AP48634 2157 aaKnown RBP7.13□□□□□ -1.27
CDH11-202ENST00000394156 SMAGPQ0VAQ4 97 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 SMR3AQ99954 134 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 MSRB1Q9NZV6 116 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 TRAV9-2A0A087WT02 112 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 TRAV1-1A0A0B4J248 108 aa7.13□□□□□ -1.27
CDH11-202ENST00000394156 LBHQ53QV2 105 aaPredicted RBP7.13□□□□□ -1.27
CDH11-202ENST00000394156 Q6ZVH6 145 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 SORL1Q92673 2214 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 A0A1B0GW64 132 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 NXPH4O95158 308 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 RNF5Q99942 180 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 NXT2Q9NPJ8 142 aaKnown RBP7.12□□□□□ -1.27
CDH11-202ENST00000394156 MPV17L2Q567V2 206 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 IGHV1-24A0A0C4DH33 117 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 SYS1-DBNDD2H3BUS1 97 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 PAX4O43316 350 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 UNQ9165/PRO28630Q6UXU0 137 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 Q9HAA7 133 aa7.12□□□□□ -1.27
CDH11-202ENST00000394156 CSPG4Q6UVK1 2322 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms