RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 SMR3AQ99954 134 aa16.74■□□□□ 0.27
HMGA2-203ENST00000393578 TP53TG3Q9ULZ0 132 aa16.74■□□□□ 0.27
HMGA2-203ENST00000393578 ORM1P02763 201 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 LINC01559Q495D7 138 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 KHDC1LQ5JSQ8 128 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 BORCS7Q96B45 105 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 PACRGQ96M98 296 aaPredicted RBP16.73■□□□□ 0.27
HMGA2-203ENST00000393578 MS4A6AQ9H2W1 248 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 BAGE3Q86Y29 109 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 OR11H1Q8NG94 326 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 OR8A1Q8NGG7 326 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 DPF1Q92782 380 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 TPPP3Q9BW30 176 aa16.73■□□□□ 0.27
HMGA2-203ENST00000393578 SLURP1P55000 103 aa16.72■□□□□ 0.27
HMGA2-203ENST00000393578 OR1N2Q8NGR9 330 aa16.72■□□□□ 0.27
HMGA2-203ENST00000393578 TMEM18Q96B42 140 aa16.72■□□□□ 0.27
HMGA2-203ENST00000393578 C16orf95Q9H693 158 aa16.72■□□□□ 0.27
HMGA2-203ENST00000393578 M0QZ24 198 aa16.71■□□□□ 0.27
HMGA2-203ENST00000393578 HILS1P60008 231 aa16.71■□□□□ 0.27
HMGA2-203ENST00000393578 LYZL1Q6UWQ5 148 aa16.71■□□□□ 0.27
HMGA2-203ENST00000393578 ZNF575Q86XF7 245 aa16.71■□□□□ 0.27
HMGA2-203ENST00000393578 KLHL30-AS1Q8NEE0 82 aa16.71■□□□□ 0.27
HMGA2-203ENST00000393578 ESDP10768 282 aa16.71■□□□□ 0.27
HMGA2-203ENST00000393578 NUPR1O60356 82 aa16.7■□□□□ 0.26
HMGA2-203ENST00000393578 LY6G6DO95868 133 aa16.7■□□□□ 0.26
HMGA2-203ENST00000393578 WFDC3Q8IUB2 231 aa16.7■□□□□ 0.26
HMGA2-203ENST00000393578 GATD1Q8NB37 220 aa16.7■□□□□ 0.26
HMGA2-203ENST00000393578 TRBV7-9A0A0J9YWB2 115 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 SERF1AO75920 110 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 IGLC6P0CF74 106 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 CTRLP40313 264 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 LINC00310P59036 64 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 DEFB1P60022 68 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 FER1L6-AS1Q8NA97 138 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 MTORP42345 2549 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 NF1P21359 2839 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 F6UB75 175 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 FAM19A4Q96LR4 140 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 ALKBH7Q9BT30 221 aaPredicted RBP16.69■□□□□ 0.26
HMGA2-203ENST00000393578 PEMTQ9UBM1 199 aa16.69■□□□□ 0.26
HMGA2-203ENST00000393578 NOTCH2Q04721 2471 aa16.68■□□□□ 0.26
HMGA2-203ENST00000393578 F2Z2F3 143 aa16.68■□□□□ 0.26
HMGA2-203ENST00000393578 K7EQG2 157 aa16.68■□□□□ 0.26
HMGA2-203ENST00000393578 SNRPD3P62318 126 aaKnown RBP16.68■□□□□ 0.26
HMGA2-203ENST00000393578 ADAMTSL5Q6ZMM2 481 aa16.68■□□□□ 0.26
HMGA2-203ENST00000393578 ZFAND2AQ8N6M9 145 aa16.68■□□□□ 0.26
HMGA2-203ENST00000393578 LINC01006Q8NI28 216 aa16.68■□□□□ 0.26
HMGA2-203ENST00000393578 OR9G4Q8NGQ1 327 aa16.68■□□□□ 0.26
HMGA2-203ENST00000393578 OTOGQ6ZRI0 2925 aa16.67■□□□□ 0.26
HMGA2-203ENST00000393578 IGKV3D-20A0A0C4DH25 116 aa16.67■□□□□ 0.26
HMGA2-203ENST00000393578 TFPI2P48307 235 aa16.67■□□□□ 0.26
HMGA2-203ENST00000393578 PYY3Q5JQD4 70 aa16.67■□□□□ 0.26
HMGA2-203ENST00000393578 C18orf32Q8TCD1 76 aa16.67■□□□□ 0.26
HMGA2-203ENST00000393578 C11orf21Q9P2W6 132 aa16.67■□□□□ 0.26
HMGA2-203ENST00000393578 HIVEP2P31629 2446 aa16.67■□□□□ 0.26
HMGA2-203ENST00000393578 LOC102724200A0A096LPH7 203 aaPredicted RBP16.66■□□□□ 0.26
HMGA2-203ENST00000393578 PRR9Q5T870 116 aa16.66■□□□□ 0.26
HMGA2-203ENST00000393578 DUX3Q96PT4 197 aa16.66■□□□□ 0.26
HMGA2-203ENST00000393578 CUBNO60494 3623 aa16.66■□□□□ 0.26
HMGA2-203ENST00000393578 ZNF493Q6ZR52 646 aa16.66■□□□□ 0.26
HMGA2-203ENST00000393578 PAFAH1B2P68402 229 aa16.65■□□□□ 0.26
HMGA2-203ENST00000393578 JMJD8Q96S16 334 aa16.65■□□□□ 0.26
HMGA2-203ENST00000393578 CNFNQ9BYD5 112 aa16.65■□□□□ 0.26
HMGA2-203ENST00000393578 ZNF688P0C7X2 276 aa16.64■□□□□ 0.25
HMGA2-203ENST00000393578 PSMG4Q5JS54 123 aa16.64■□□□□ 0.25
HMGA2-203ENST00000393578 PRR31Q5SQ13 230 aa16.64■□□□□ 0.25
HMGA2-203ENST00000393578 APRG1Q8IVJ8 170 aa16.64■□□□□ 0.25
HMGA2-203ENST00000393578 DLX4Q92988 240 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-203ENST00000393578 GPX1P07203 203 aa16.64■□□□□ 0.25
HMGA2-203ENST00000393578 CD28P10747 220 aa16.64■□□□□ 0.25
HMGA2-203ENST00000393578 RCHY1Q96PM5 261 aa16.64■□□□□ 0.25
HMGA2-203ENST00000393578 TRAV21A0A0B4J279 112 aa16.63■□□□□ 0.25
HMGA2-203ENST00000393578 NDUFA7O95182 113 aa16.62■□□□□ 0.25
HMGA2-203ENST00000393578 HIST2H2BDQ6DRA6 164 aa16.62■□□□□ 0.25
HMGA2-203ENST00000393578 Q6ZQT7 251 aa16.62■□□□□ 0.25
HMGA2-203ENST00000393578 C11orf44Q8N8P7 122 aa16.62■□□□□ 0.25
HMGA2-203ENST00000393578 RAX2Q96IS3 184 aa16.62■□□□□ 0.25
HMGA2-203ENST00000393578 KCNS1Q96KK3 526 aa16.62■□□□□ 0.25
HMGA2-203ENST00000393578 NIT2Q9NQR4 276 aa16.62■□□□□ 0.25
HMGA2-203ENST00000393578 J3KRW8 73 aa16.61■□□□□ 0.25
HMGA2-203ENST00000393578 NTF3P20783 257 aa16.61■□□□□ 0.25
HMGA2-203ENST00000393578 TWIST1Q15672 202 aa16.61■□□□□ 0.25
HMGA2-203ENST00000393578 IQCJQ1A5X6 159 aa16.61■□□□□ 0.25
HMGA2-203ENST00000393578 TSSC4Q9Y5U2 329 aaPredicted RBP16.61■□□□□ 0.25
HMGA2-203ENST00000393578 MUC21A0A0G2JKD1 596 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 MUC21A0A140T8X8 626 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 CSN3P07498 182 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 SSTP61278 116 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 FHL3Q13643 280 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 MUC21Q5SSG8 566 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 A0A0J9YX75 114 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 ODF3Q96PU9 254 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 CITED2Q99967 270 aaPredicted RBP16.6■□□□□ 0.25
HMGA2-203ENST00000393578 SAMD10Q9BYL1 202 aa16.6■□□□□ 0.25
HMGA2-203ENST00000393578 RNASE4P34096 147 aaKnown RBP16.59■□□□□ 0.25
HMGA2-203ENST00000393578 JOSD1Q15040 202 aaPredicted RBP16.59■□□□□ 0.25
HMGA2-203ENST00000393578 TRAV2A0A0B4J234 112 aa16.58■□□□□ 0.25
HMGA2-203ENST00000393578 A0A1W2PRX2 142 aa16.58■□□□□ 0.25
HMGA2-203ENST00000393578 KLLNB2CW77 178 aa16.58■□□□□ 0.25
HMGA2-203ENST00000393578 EBLN2Q6P2I7 272 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms