RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 CRYBA4P53673 196 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 SHANK2-AS3Q9BTD1 123 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 A0A1B0GV72 72 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 K7EIM0 57 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 M0R381 172 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 GFRALQ6UXV0 394 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 ZFP2Q6ZN57 461 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 I3L2K1 104 aa11.33□□□□□ -0.6
SFXN3-202ENST00000393459 CRYGCP07315 174 aa11.33□□□□□ -0.6
SFXN3-202ENST00000393459 C1orf122Q6ZSJ8 110 aa11.33□□□□□ -0.6
SFXN3-202ENST00000393459 PRR25Q96S07 402 aa11.33□□□□□ -0.6
SFXN3-202ENST00000393459 CHTOPQ9Y3Y2 248 aaKnown RBP11.33□□□□□ -0.6
SFXN3-202ENST00000393459 TMEM178BH3BS89 294 aa11.33□□□□□ -0.6
SFXN3-202ENST00000393459 SRSF9Q13242 221 aaKnown RBP eCLIP11.33□□□□□ -0.6
SFXN3-202ENST00000393459 DTX2Q86UW9 622 aa11.33□□□□□ -0.6
SFXN3-202ENST00000393459 CHD8Q9HCK8 2581 aa11.33□□□□□ -0.6
SFXN3-202ENST00000393459 NDUFS8O00217 210 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 DPM2O94777 84 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 MT-ATP8P03928 68 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 ARL3P36405 182 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 ATP5IP56385 69 aaPredicted RBP11.32□□□□□ -0.6
SFXN3-202ENST00000393459 DYNAPQ8N1N2 210 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 LINC00527Q9UJ94 153 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 NDPQ00604 133 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 IGFL3Q6UXB1 125 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 MC5RP33032 325 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 CFHR4Q92496 578 aa11.32□□□□□ -0.6
SFXN3-202ENST00000393459 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
SFXN3-202ENST00000393459 LINC01549A6NIU2 74 aa11.31□□□□□ -0.6
SFXN3-202ENST00000393459 TTC9CQ8N5M4 171 aa11.31□□□□□ -0.6
SFXN3-202ENST00000393459 MYOZ3Q8TDC0 251 aa11.31□□□□□ -0.6
SFXN3-202ENST00000393459 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
SFXN3-202ENST00000393459 IGHV3-64A0A075B6Q5 118 aa11.31□□□□□ -0.6
SFXN3-202ENST00000393459 J3QR89 54 aa11.31□□□□□ -0.6
SFXN3-202ENST00000393459 SPANXN1Q5VSR9 72 aa11.31□□□□□ -0.6
SFXN3-202ENST00000393459 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
SFXN3-202ENST00000393459 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
SFXN3-202ENST00000393459 RNF185Q96GF1 192 aa11.3□□□□□ -0.6
SFXN3-202ENST00000393459 SS18L2Q9UHA2 77 aa11.3□□□□□ -0.6
SFXN3-202ENST00000393459 H3BRN7 92 aa11.3□□□□□ -0.6
SFXN3-202ENST00000393459 MGPP08493 103 aa11.3□□□□□ -0.6
SFXN3-202ENST00000393459 IGF1P05019 195 aa11.29□□□□□ -0.6
SFXN3-202ENST00000393459 GATA4P43694 442 aa11.29□□□□□ -0.6
SFXN3-202ENST00000393459 HRNRQ86YZ3 2850 aaPredicted RBP11.29□□□□□ -0.6
SFXN3-202ENST00000393459 ZNF292O60281 2723 aa11.29□□□□□ -0.6
SFXN3-202ENST00000393459 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
SFXN3-202ENST00000393459 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
SFXN3-202ENST00000393459 C11orf21Q9P2W6 132 aa11.28□□□□□ -0.6
SFXN3-202ENST00000393459 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
SFXN3-202ENST00000393459 PRTN3P24158 256 aa11.28□□□□□ -0.6
SFXN3-202ENST00000393459 TEX36Q5VZQ5 186 aa11.28□□□□□ -0.6
SFXN3-202ENST00000393459 Q6ZS92 163 aa11.27□□□□□ -0.6
SFXN3-202ENST00000393459 NCOR1P1Q9H4R4 102 aa11.27□□□□□ -0.6
SFXN3-202ENST00000393459 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.61
SFXN3-202ENST00000393459 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 PLEKHB2Q96CS7 222 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 RPL39LQ96EH5 51 aaKnown RBP11.27□□□□□ -0.61
SFXN3-202ENST00000393459 SONP18583 2426 aaKnown RBP11.27□□□□□ -0.61
SFXN3-202ENST00000393459 OR11H12B2RN74 326 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 NFE4Q86UQ8 179 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 C3orf56Q8N813 242 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 OR11H2Q8NH07 326 aa11.27□□□□□ -0.61
SFXN3-202ENST00000393459 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
SFXN3-202ENST00000393459 E9PLD3 99 aa11.26□□□□□ -0.61
SFXN3-202ENST00000393459 FHL3Q13643 280 aa11.26□□□□□ -0.61
SFXN3-202ENST00000393459 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
SFXN3-202ENST00000393459 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
SFXN3-202ENST00000393459 C14orf178Q8N769 122 aaPredicted RBP11.25□□□□□ -0.61
SFXN3-202ENST00000393459 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
SFXN3-202ENST00000393459 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
SFXN3-202ENST00000393459 TRBV20-1A0A075B6N2 111 aa11.25□□□□□ -0.61
SFXN3-202ENST00000393459 MBD3L4A6NDZ8 208 aaPredicted RBP11.25□□□□□ -0.61
SFXN3-202ENST00000393459 MBD3L3A6NE82 208 aaPredicted RBP11.25□□□□□ -0.61
SFXN3-202ENST00000393459 MBD3L5A6NJ08 208 aaPredicted RBP11.25□□□□□ -0.61
SFXN3-202ENST00000393459 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
SFXN3-202ENST00000393459 SLC25A16P16260 332 aa11.25□□□□□ -0.61
SFXN3-202ENST00000393459 BMI1P35226 326 aa11.25□□□□□ -0.61
SFXN3-202ENST00000393459 MBD3L2Q8NHZ7 208 aaPredicted RBP11.25□□□□□ -0.61
SFXN3-202ENST00000393459 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
SFXN3-202ENST00000393459 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
SFXN3-202ENST00000393459 PAX8Q06710 450 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 RNF183Q96D59 192 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 SCGB3A1Q96QR1 104 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 PRSS29PA6NIE9 313 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 FAM90A27PA6NNH2 459 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 HOXA3O43365 443 aaPredicted RBP11.24□□□□□ -0.61
SFXN3-202ENST00000393459 Q6AWC8 147 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 ASCL5Q7RTU5 278 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 SIVA1O15304 175 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 XGP55808 180 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 RRN3P1Q2M238 152 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms