RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CICQ96RK0 1608 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 SBF1O95248 1867 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 MRC1P22897 1456 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 TRAV30A0A087WSZ9 112 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 C3orf85A0A1B0GTC6 90 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 A0A1B0GW64 132 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 C1orf196B1AJZ1 125 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 F5H5K5 113 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 K7EN84 100 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 ARPC5O15511 151 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 RNF13O43567 381 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 PITX3O75364 302 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 EIF3JO75822 258 aaKnown RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 LDOC1O95751 146 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CST4P01036 141 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 IFNA21P01568 189 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 SLC35E2BP0CK96 405 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 SAA1P0DJI8 122 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 HLA-EP13747 358 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 IDO1P14902 403 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CXCL3P19876 107 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 ERP29P30040 261 aaKnown RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 RANBP1P43487 201 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 AIF1P55008 147 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CLDN8P56748 225 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 EDDM3BP56851 147 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 RGS8P57771 180 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 YBEYP58557 167 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 AP3S2P59780 193 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 RAB5BP61020 215 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 PRLHP81277 87 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CCDC152Q4G0S7 254 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 FBXO48Q5FWF7 155 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 Q6JHZ5 121 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 HEPN1Q6WQI6 88 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 TMEM91Q6ZNR0 172 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CYP2G1PQ6ZSU1 146 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CENPQQ7L2Z9 268 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 SSX9Q7RTT3 188 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 C20orf197Q8N268 126 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 OR5AK3PQ8NH89 298 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 FAM172AQ8WUF8 416 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 BRK1Q8WUW1 75 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 C2orf50Q96LR7 162 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 ZMAT2Q96NC0 199 aaKnown RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 MRPL34Q9BQ48 92 aaKnown RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 TIPINQ9BVW5 301 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 C20orf27Q9GZN8 174 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 TMEM133Q9H2Q1 129 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 ELOVL6Q9H5J4 265 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CACYBPQ9HB71 228 aaKnown RBP-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 POLE3Q9NRF9 147 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 NDUFA4L2Q9NRX3 87 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 FBXL12Q9NXK8 326 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 TAS2R3Q9NYW6 316 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 VPS29Q9UBQ0 182 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 EXTL2Q9UBQ6 330 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 NDUFA12Q9UI09 145 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 BLOC1S6Q9UL45 172 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 ASB4Q9Y574 426 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 MGAQ8IWI9 3026 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 TAF1LQ8IZX4 1826 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 CRYBG3Q68DQ2 2970 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 NINLQ9Y2I6 1382 aa-0.96□□□□□ -2.56
TRAJ28-201ENST00000390509 RIMBP3CA6NJZ7 1639 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 RIMBP3BA6NNM3 1639 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 RIMBP3Q9UFD9 1639 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 MYOM3Q5VTT5 1437 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 AQRO60306 1485 aaKnown RBP eCLIP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 ARAP1Q96P48 1450 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 A0A087WUJ7 227 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 A0A1B0GV50 99 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 EXOC1LA0A1B0GW35 172 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 TMEM210A6NLX4 147 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 A8MT66 165 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 I3L3M4 83 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CCL22O00626 93 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CDC42EP2O14613 210 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 FIBPO43427 364 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 STX10O60499 249 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 SPAG6O75602 509 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 ATP5HO75947 161 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CST7O76096 145 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 SERPINA1P01009 418 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 IFNA5P01569 189 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 ORM1P02763 201 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CCL1P22362 96 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 POLR2JP52435 117 aaKnown RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CXCR4P61073 352 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 RANP62826 216 aaKnown RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 BTG2P78543 158 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 LCN2P80188 198 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 TMED1Q13445 227 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 HSP90AA4PQ58FG1 418 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 COQ5Q5HYK3 327 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 OR2T2Q6IF00 324 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 Q6ZT83 130 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 MRPL52Q86TS9 123 aaKnown RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 NDUFA11Q86Y39 141 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 309.8 ms