RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 C1orf122Q6ZSJ8 110 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 SPRY2O43597 315 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 WFDC2Q14508 124 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 MEIG1Q5JSS6 88 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 Q6ZS92 163 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 Q8N976 141 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 TSPAN13O95857 204 aa10.37□□□□□ -0.75
TRAPPC9-201ENST00000389328 PIEZO2Q9H5I5 2752 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 NPC2P61916 151 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 NEGR1Q7Z3B1 354 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 DKK4Q9UBT3 224 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 LAMA2P24043 3122 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 HTTP42858 3142 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 A0A0U1RRA0 63 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 A0A1W2PNU3 283 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 BOD1L2Q8IYS8 172 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 KIAA1549Q9HCM3 1950 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 A0A087WWL8 130 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 SNRPD3P62318 126 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 PRSS33Q8NF86 280 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 ATG2AQ2TAZ0 1938 aa10.36□□□□□ -0.75
TRAPPC9-201ENST00000389328 TRAV12-3A0A0B4J271 114 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 MYMXA0A1B0GTQ4 84 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 C9JAW5 83 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 CR1LQ2VPA4 569 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 C1orf159Q96HA4 380 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 TNFRSF18Q9Y5U5 241 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 CLEC2AQ6UVW9 174 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 PRSS22Q9GZN4 317 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 CGB3P0DN86 165 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 CGB7P0DN87 165 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 C10orf142B7Z368 130 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 DYNAPQ8N1N2 210 aa10.35□□□□□ -0.75
TRAPPC9-201ENST00000389328 F8VRH5 84 aa10.34□□□□□ -0.75
TRAPPC9-201ENST00000389328 WT1P19544 449 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC9-201ENST00000389328 MLST8Q9BVC4 326 aa10.34□□□□□ -0.75
TRAPPC9-201ENST00000389328 G3V318 75 aa10.34□□□□□ -0.75
TRAPPC9-201ENST00000389328 TMEM95Q3KNT9 176 aa10.34□□□□□ -0.75
TRAPPC9-201ENST00000389328 I3L2K1 104 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 K7EIM0 57 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 OVOL1O14753 267 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 IGLV2-23P01705 113 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 IGKV3OR2-268A0A0C4DH90 116 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 IGLL5B9A064 214 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 THBDP07204 575 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 HLA-DRB4P13762 266 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 C10orf126Q8N4M7 172 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 HLA-DRB4X5D2U9 266 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 G3V4G9 280 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 SONP18583 2426 aaKnown RBP10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 PTPN13Q12923 2485 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 TRAV8-4A0A0B4J246 113 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 C9orf139Q6ZV77 190 aa10.33□□□□□ -0.76
TRAPPC9-201ENST00000389328 CPAMD8Q8IZJ3 1885 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 DYNLRB2Q8TF09 96 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 SMIM2Q9BVW6 85 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 TP53TG1Q9Y2A0 90 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 TRAV41A0A0B4J266 112 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 KLRB1Q12918 225 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 NPFFO15130 113 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 CFHR4Q92496 578 aa10.32□□□□□ -0.76
TRAPPC9-201ENST00000389328 MKI67P46013 3256 aaKnown RBP10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 A0A087WX48 190 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 ATP6V0E1O15342 81 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 CD28P10747 220 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 TNRC6AQ8NDV7 1962 aaKnown RBP10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 VCYO14598 125 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 RRN3P1Q2M238 152 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 SPRY4Q9C004 299 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 VWC2LB2RUY7 222 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 FCN3O75636 299 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 ZNF876PQ49A33 203 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 C3orf36Q3SXR2 165 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 FOXI2Q6ZQN5 318 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 AGPAT4-IT1Q9H0P7 198 aa10.31□□□□□ -0.76
TRAPPC9-201ENST00000389328 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
TRAPPC9-201ENST00000389328 FOXE3Q13461 319 aa10.3□□□□□ -0.76
TRAPPC9-201ENST00000389328 LAMA3Q16787 3333 aa10.3□□□□□ -0.76
TRAPPC9-201ENST00000389328 PRR30Q53SZ7 412 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC9-201ENST00000389328 SEM1Q6ZVN7 128 aa10.3□□□□□ -0.76
TRAPPC9-201ENST00000389328 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
TRAPPC9-201ENST00000389328 NCKAP5O14513 1909 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 TAL2Q16559 108 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 DUX5Q96PT3 197 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 PTPRSQ13332 1948 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 INS-IGF2F8WCM5 200 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 M0R1W7 72 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 CRYGCP07315 174 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 MINOS1Q5TGZ0 78 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms