RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 TGIF2-C20orf24A0A0A6YYL0 155 aa19.94■□□□□ 0.78
MSX1-201ENST00000382723 KCNIP4Q6PIL6 250 aa19.93■□□□□ 0.78
MSX1-201ENST00000382723 SHISA2Q6UWI4 295 aa19.93■□□□□ 0.78
MSX1-201ENST00000382723 VWFP04275 2813 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 TCL1AP56279 114 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 RPL19P84098 196 aaKnown RBP19.92■□□□□ 0.78
MSX1-201ENST00000382723 ODF3L2Q3SX64 289 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 PRR9Q5T870 116 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 FAM19A4Q96LR4 140 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 CXCL1P09341 107 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 ZFAND2AQ8N6M9 145 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 OR2D3Q8NGH3 330 aa19.92■□□□□ 0.78
MSX1-201ENST00000382723 A0A1W2PPQ1 181 aa19.91■□□□□ 0.78
MSX1-201ENST00000382723 DUSP14O95147 198 aaKnown RBP19.91■□□□□ 0.78
MSX1-201ENST00000382723 C9orf66Q5T8R8 295 aa19.91■□□□□ 0.78
MSX1-201ENST00000382723 IMMP2LQ96T52 175 aa19.91■□□□□ 0.78
MSX1-201ENST00000382723 FABP5P3A8MUU1 101 aa19.9■□□□□ 0.78
MSX1-201ENST00000382723 GPX1P07203 203 aa19.9■□□□□ 0.78
MSX1-201ENST00000382723 KIR3DS1Q14943 382 aa19.9■□□□□ 0.78
MSX1-201ENST00000382723 OR11H12B2RN74 326 aa19.89■□□□□ 0.77
MSX1-201ENST00000382723 INSL3P51460 131 aa19.89■□□□□ 0.77
MSX1-201ENST00000382723 HLA-DRB4P13762 266 aa19.88■□□□□ 0.77
MSX1-201ENST00000382723 RNASE4P34096 147 aaKnown RBP19.88■□□□□ 0.77
MSX1-201ENST00000382723 Q6ZQT7 251 aa19.88■□□□□ 0.77
MSX1-201ENST00000382723 HLA-DRB4X5D2U9 266 aa19.88■□□□□ 0.77
MSX1-201ENST00000382723 SORL1Q92673 2214 aa19.88■□□□□ 0.77
MSX1-201ENST00000382723 TMSB15BA0A087X1C1 80 aa19.88■□□□□ 0.77
MSX1-201ENST00000382723 GZMBP10144 247 aa19.88■□□□□ 0.77
MSX1-201ENST00000382723 TSKUQ8WUA8 353 aa19.88■□□□□ 0.77
MSX1-201ENST00000382723 SMIM27A0A1W2PRY6 76 aa19.87■□□□□ 0.77
MSX1-201ENST00000382723 H3BMM0 161 aa19.87■□□□□ 0.77
MSX1-201ENST00000382723 CD7P09564 240 aa19.87■□□□□ 0.77
MSX1-201ENST00000382723 CRISP2P16562 243 aa19.87■□□□□ 0.77
MSX1-201ENST00000382723 BEAN1Q3B7T3 259 aa19.87■□□□□ 0.77
MSX1-201ENST00000382723 TRBV7-9A0A0J9YWB2 115 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 TMEM189A5PLL7 270 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 A8MWL6 223 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 ORM1P02763 201 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 CT83Q5H943 113 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 WFDC9Q8NEX5 89 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 FAM210BQ96KR6 192 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 NEU1Q99519 415 aa19.86■□□□□ 0.77
MSX1-201ENST00000382723 M0R2Z0 102 aa19.85■□□□□ 0.77
MSX1-201ENST00000382723 IGLL1P15814 213 aa19.85■□□□□ 0.77
MSX1-201ENST00000382723 LEPP41159 167 aa19.85■□□□□ 0.77
MSX1-201ENST00000382723 ODF3Q96PU9 254 aa19.85■□□□□ 0.77
MSX1-201ENST00000382723 TRBV24-1A0A075B6N3 115 aa19.84■□□□□ 0.77
MSX1-201ENST00000382723 SPINK4O60575 86 aa19.84■□□□□ 0.77
MSX1-201ENST00000382723 SPINK13Q1W4C9 94 aa19.84■□□□□ 0.77
MSX1-201ENST00000382723 MCRIP2Q9BUT9 160 aaKnown RBP19.84■□□□□ 0.77
MSX1-201ENST00000382723 RAB5AP20339 215 aa19.84■□□□□ 0.77
MSX1-201ENST00000382723 AMTNQ6UX39 209 aa19.84■□□□□ 0.77
MSX1-201ENST00000382723 C11orf21Q9P2W6 132 aa19.84■□□□□ 0.77
MSX1-201ENST00000382723 HIGD1CA8MV81 97 aa19.83■□□□□ 0.77
MSX1-201ENST00000382723 KLLNB2CW77 178 aa19.83■□□□□ 0.77
MSX1-201ENST00000382723 CMC4P56277 68 aaPredicted RBP19.83■□□□□ 0.77
MSX1-201ENST00000382723 FXYD7P58549 80 aa19.83■□□□□ 0.77
MSX1-201ENST00000382723 GTSF1Q8WW33 167 aa19.83■□□□□ 0.77
MSX1-201ENST00000382723 TRAV12-2A0A075B6T6 113 aa19.82■□□□□ 0.76
MSX1-201ENST00000382723 PYGO2Q9BRQ0 406 aa19.82■□□□□ 0.76
MSX1-201ENST00000382723 WFDC10AQ9H1F0 79 aa19.82■□□□□ 0.76
MSX1-201ENST00000382723 NAT8BQ9UHF3 227 aa19.82■□□□□ 0.76
MSX1-201ENST00000382723 TRRAPQ9Y4A5 3859 aa19.82■□□□□ 0.76
MSX1-201ENST00000382723 TRAV21A0A0B4J279 112 aa19.81■□□□□ 0.76
MSX1-201ENST00000382723 RBMY1BA6NDE4 496 aaKnown RBP19.81■□□□□ 0.76
MSX1-201ENST00000382723 RBMY1EA6NEQ0 496 aaKnown RBP19.81■□□□□ 0.76
MSX1-201ENST00000382723 RBMY1DP0C7P1 496 aaKnown RBP19.81■□□□□ 0.76
MSX1-201ENST00000382723 TSPOP30536 169 aa19.81■□□□□ 0.76
MSX1-201ENST00000382723 CDKN1BP46527 198 aa19.81■□□□□ 0.76
MSX1-201ENST00000382723 NUP35Q8NFH5 326 aa19.81■□□□□ 0.76
MSX1-201ENST00000382723 BTF3L4Q96K17 158 aa19.81■□□□□ 0.76
MSX1-201ENST00000382723 NAGKQ9UJ70 344 aa19.81■□□□□ 0.76
MSX1-201ENST00000382723 STAB1Q9NY15 2570 aa19.81■□□□□ 0.76
MSX1-201ENST00000382723 STHQ8IWL8 128 aa19.8■□□□□ 0.76
MSX1-201ENST00000382723 AGRNO00468 2067 aa19.8■□□□□ 0.76
MSX1-201ENST00000382723 TRAV12-3A0A0B4J271 114 aa19.8■□□□□ 0.76
MSX1-201ENST00000382723 RPS10P46783 165 aaKnown RBP19.8■□□□□ 0.76
MSX1-201ENST00000382723 LINC01559Q495D7 138 aa19.8■□□□□ 0.76
MSX1-201ENST00000382723 Q6AWC8 147 aa19.8■□□□□ 0.76
MSX1-201ENST00000382723 PGLYRP4Q96LB8 373 aa19.8■□□□□ 0.76
MSX1-201ENST00000382723 GFRA4Q9GZZ7 299 aa19.8■□□□□ 0.76
MSX1-201ENST00000382723 IGKV3D-20A0A0C4DH25 116 aa19.79■□□□□ 0.76
MSX1-201ENST00000382723 XKRY2A2RUG3 117 aa19.79■□□□□ 0.76
MSX1-201ENST00000382723 GRIFINA4D1Z8 144 aa19.79■□□□□ 0.76
MSX1-201ENST00000382723 A8MTW9 85 aa19.79■□□□□ 0.76
MSX1-201ENST00000382723 GFI1BQ5VTD9 330 aa19.79■□□□□ 0.76
MSX1-201ENST00000382723 TPPP3Q9BW30 176 aa19.79■□□□□ 0.76
MSX1-201ENST00000382723 C19orf73Q9NVV2 129 aa19.79■□□□□ 0.76
MSX1-201ENST00000382723 C7orf71A4D174 169 aa19.78■□□□□ 0.76
MSX1-201ENST00000382723 TRAV9-1A0A075B6T8 112 aa19.78■□□□□ 0.76
MSX1-201ENST00000382723 MUC21Q5SSG8 566 aa19.78■□□□□ 0.76
MSX1-201ENST00000382723 MRPL54Q6P161 138 aaKnown RBP19.78■□□□□ 0.76
MSX1-201ENST00000382723 FAM110AQ9BQ89 295 aa19.78■□□□□ 0.76
MSX1-201ENST00000382723 COL6A5A8TX70 2615 aa19.78■□□□□ 0.76
MSX1-201ENST00000382723 RPS20P60866 119 aaKnown RBP19.77■□□□□ 0.76
MSX1-201ENST00000382723 ZNF575Q86XF7 245 aa19.77■□□□□ 0.76
MSX1-201ENST00000382723 FAM231BA6NCW3 169 aa19.76■□□□□ 0.75
MSX1-201ENST00000382723 FRMD6-AS1P0C7T7 363 aa19.76■□□□□ 0.75
MSX1-201ENST00000382723 GTSCR1Q86UQ5 136 aa19.76■□□□□ 0.75
MSX1-201ENST00000382723 TRPT1Q86TN4 253 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms