RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 C10orf105Q8TEF2 133 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 ZNF48Q96MX3 618 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-202ENST00000381990 COL12A1Q99715 3063 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 M0R3E3 92 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 ZNF207O43670 478 aaKnown RBP6.94□□□□□ -1.3
GPNMB-202ENST00000381990 IGKCP01834 107 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 IGLC6P0CF74 106 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 RPL24P83731 157 aaKnown RBP6.94□□□□□ -1.3
GPNMB-202ENST00000381990 TAL2Q16559 108 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 Q8N6K4 173 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 PRR25Q96S07 402 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 SIGMAR1Q99720 223 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 SPG11Q96JI7 2443 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 FCGR2BP31994 310 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-202ENST00000381990 FXYD2P54710 66 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 ATP5J2P56134 94 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 CLEC2AQ6UVW9 174 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 PRSS57Q6UWY2 283 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 ZNF562Q6V9R5 426 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 PHLDA1Q8WV24 401 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-202ENST00000381990 EPG5Q9HCE0 2579 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 CD300EQ496F6 205 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-202ENST00000381990 CEND1Q8N111 149 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 ABCA1O95477 2261 aa6.93□□□□□ -1.3
GPNMB-202ENST00000381990 TRBV25-1A0A075B6N4 114 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 TMSB15BA0A087X1C1 80 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 IGHV4-61A0A0C4DH41 118 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 E9PLD3 99 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 DPM2O94777 84 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 RPL7P18124 248 aaKnown RBP6.92□□□□□ -1.3
GPNMB-202ENST00000381990 SAA4P35542 130 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 LEPP41159 167 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 AJUBAQ96IF1 538 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 ABCA2Q9BZC7 2435 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 NCBP2LA6PVI3 153 aaKnown RBP6.92□□□□□ -1.3
GPNMB-202ENST00000381990 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-202ENST00000381990 FXYD7P58549 80 aa6.92□□□□□ -1.3
GPNMB-202ENST00000381990 KLF17Q5JT82 389 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-202ENST00000381990 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 A0A1B0GV72 72 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 NPFFO15130 113 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 GNG7O60262 68 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 PRSS1P07477 247 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 TCTAP57738 103 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 C18orf15Q96N68 181 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 ASCL2Q99929 193 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 FAM208BQ5VWN6 2430 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 ASH1LQ9NR48 2969 aaKnown RBP6.91□□□□□ -1.3
GPNMB-202ENST00000381990 SMKR1H3BMG3 65 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 SCGB2A1O75556 95 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 AZU1P20160 251 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 ARPC1AQ92747 370 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 LRRK2Q5S007 2527 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 CENPVL3A0A0U1RRI6 287 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 TNFRSF6BO95407 300 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 COX6B1P14854 86 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
GPNMB-202ENST00000381990 NHP2Q9NX24 153 aaKnown RBP6.91□□□□□ -1.3
GPNMB-202ENST00000381990 UBR5O95071 2799 aaPredicted RBP6.9□□□□□ -1.3
GPNMB-202ENST00000381990 IGHV4-30-2A0A087WSY4 118 aa6.9□□□□□ -1.3
GPNMB-202ENST00000381990 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
GPNMB-202ENST00000381990 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.3
GPNMB-202ENST00000381990 MFAP4P55083 255 aa6.9□□□□□ -1.3
GPNMB-202ENST00000381990 DSCR9P59020 149 aa6.9□□□□□ -1.3
GPNMB-202ENST00000381990 ZC2HC1BQ5TFG8 222 aa6.9□□□□□ -1.3
GPNMB-202ENST00000381990 Q8N8P6 123 aa6.9□□□□□ -1.3
GPNMB-202ENST00000381990 SPANXB1Q9NS25 103 aaPredicted RBP6.9□□□□□ -1.3
GPNMB-202ENST00000381990 PRSS47A8MTI9 375 aa6.9□□□□□ -1.31
GPNMB-202ENST00000381990 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.31
GPNMB-202ENST00000381990 LINC01619G3V211 115 aa6.9□□□□□ -1.31
GPNMB-202ENST00000381990 PLNP26678 52 aa6.9□□□□□ -1.31
GPNMB-202ENST00000381990 Q8N9W7 124 aa6.9□□□□□ -1.31
GPNMB-202ENST00000381990 ZNF502Q8TBZ5 544 aa6.9□□□□□ -1.31
GPNMB-202ENST00000381990 ZNF479Q96JC4 524 aa6.9□□□□□ -1.31
GPNMB-202ENST00000381990 IGKV2-40A0A087WW87 121 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-202ENST00000381990 IGLL5B9A064 214 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 IGKV2D-40P01614 121 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-202ENST00000381990 NDPQ00604 133 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 TTC9CQ8N5M4 171 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 FOXC2Q99958 501 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 IGHV1-69DA0A0B4J2H0 117 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 K7ERJ3 54 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 IGHV1-69P01742 117 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 MYOZ3Q8TDC0 251 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 GTSF1LQ9H1H1 148 aa6.89□□□□□ -1.31
GPNMB-202ENST00000381990 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
GPNMB-202ENST00000381990 IGHV7-81A0A0B4J1V7 117 aa6.88□□□□□ -1.31
GPNMB-202ENST00000381990 ORM1P02763 201 aa6.88□□□□□ -1.31
GPNMB-202ENST00000381990 ZNF80P51504 273 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-202ENST00000381990 GTSCR1Q86UQ5 136 aa6.88□□□□□ -1.31
GPNMB-202ENST00000381990 TMEM158Q8WZ71 300 aa6.88□□□□□ -1.31
GPNMB-202ENST00000381990 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
GPNMB-202ENST00000381990 TSSC4Q9Y5U2 329 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-202ENST00000381990 RBAKDNA6NC62 111 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms