RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 COA6Q5JTJ3 125 aaKnown RBP9.72□□□□□ -0.85
CDX2-201ENST00000381020 RAB37Q96AX2 223 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 AGPAT4-IT1Q9H0P7 198 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 TMEM160Q9NX00 188 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 hDV102S1A0JD36 115 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 BUB3O43684 328 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 CACNG7P62955 275 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 GFRA4Q9GZZ7 299 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 LAMA5O15230 3695 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 OVOL1O14753 267 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 IGLC2P0DOY2 106 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 WI2-2373I1.2A0A1W2PRP0 233 aa9.71□□□□□ -0.85
CDX2-201ENST00000381020 GATA3P23771 443 aa9.71□□□□□ -0.85
CDX2-201ENST00000381020 TDRG1Q3Y452 100 aa9.71□□□□□ -0.85
CDX2-201ENST00000381020 C14orf178Q8N769 122 aaPredicted RBP9.71□□□□□ -0.85
CDX2-201ENST00000381020 FSTL3O95633 263 aa9.71□□□□□ -0.86
CDX2-201ENST00000381020 TSPOP30536 169 aa9.71□□□□□ -0.86
CDX2-201ENST00000381020 CHCHD1Q96BP2 118 aaKnown RBP9.71□□□□□ -0.86
CDX2-201ENST00000381020 DUX3Q96PT4 197 aa9.71□□□□□ -0.86
CDX2-201ENST00000381020 FOXC2Q99958 501 aa9.71□□□□□ -0.86
CDX2-201ENST00000381020 KLF12Q9Y4X4 402 aa9.71□□□□□ -0.86
CDX2-201ENST00000381020 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
CDX2-201ENST00000381020 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.86
CDX2-201ENST00000381020 PRSS57Q6UWY2 283 aa9.71□□□□□ -0.86
CDX2-201ENST00000381020 ZNF256Q9Y2P7 627 aaPredicted RBP9.7□□□□□ -0.86
CDX2-201ENST00000381020 FAM231BA6NCW3 169 aa9.7□□□□□ -0.86
CDX2-201ENST00000381020 HBDP02042 147 aa9.7□□□□□ -0.86
CDX2-201ENST00000381020 MSRB1Q9NZV6 116 aa9.7□□□□□ -0.86
CDX2-201ENST00000381020 FOXE3Q13461 319 aa9.7□□□□□ -0.86
CDX2-201ENST00000381020 UNQ9165/PRO28630Q6UXU0 137 aa9.7□□□□□ -0.86
CDX2-201ENST00000381020 VPS25Q9BRG1 176 aa9.7□□□□□ -0.86
CDX2-201ENST00000381020 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
CDX2-201ENST00000381020 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 LINC00469Q8N7U9 141 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 NDUFA4O00483 81 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 DEFB136Q30KP8 78 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 FAM104BQ5XKR9 115 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 DGAT2L7PQ6IED9 249 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 DSCAML1Q8TD84 2053 aa9.69□□□□□ -0.86
CDX2-201ENST00000381020 SYS1-DBNDD2H3BUS1 97 aa9.68□□□□□ -0.86
CDX2-201ENST00000381020 SYT8Q8NBV8 401 aa9.68□□□□□ -0.86
CDX2-201ENST00000381020 KLHL30-AS1Q8NEE0 82 aa9.68□□□□□ -0.86
CDX2-201ENST00000381020 AJUBAQ96IF1 538 aa9.68□□□□□ -0.86
CDX2-201ENST00000381020 CCDC140Q96MF4 163 aa9.68□□□□□ -0.86
CDX2-201ENST00000381020 FLNBO75369 2602 aaKnown RBP9.68□□□□□ -0.86
CDX2-201ENST00000381020 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
CDX2-201ENST00000381020 MAJINQ3KP22 176 aa9.68□□□□□ -0.86
CDX2-201ENST00000381020 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
CDX2-201ENST00000381020 TRAV12-2A0A075B6T6 113 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 PPBPP02775 128 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 GCSHP23434 173 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 RAX2Q96IS3 184 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 TACC2O95359 2948 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 HIST2H2BCQ6DN03 193 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 FOSL1P15407 271 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
CDX2-201ENST00000381020 A0A087WWL8 130 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 GDF5OSQ5U4N7 250 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 SCGB3A1Q96QR1 104 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 WIPF2Q8TF74 440 aaPredicted RBP9.66□□□□□ -0.86
CDX2-201ENST00000381020 EBI3Q14213 229 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 MRGPRG-AS1Q2M3A8 158 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
CDX2-201ENST00000381020 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 LINC01587Q99440 93 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 NPYP01303 97 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
CDX2-201ENST00000381020 Q71RC1 249 aaPredicted RBP9.66□□□□□ -0.86
CDX2-201ENST00000381020 SNHG12Q9BXW3 62 aa9.66□□□□□ -0.86
CDX2-201ENST00000381020 NXT2Q9NPJ8 142 aaKnown RBP9.66□□□□□ -0.86
CDX2-201ENST00000381020 TNFRSF6BO95407 300 aa9.65□□□□□ -0.86
CDX2-201ENST00000381020 DEFB131AP59861 70 aa9.65□□□□□ -0.86
CDX2-201ENST00000381020 PET117Q6UWS5 81 aa9.65□□□□□ -0.86
CDX2-201ENST00000381020 HECTD1Q9ULT8 2610 aa9.65□□□□□ -0.86
CDX2-201ENST00000381020 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
CDX2-201ENST00000381020 Q6ZS46 218 aa9.65□□□□□ -0.86
CDX2-201ENST00000381020 IGHV7-4-1A0A0J9YVY3 117 aa9.65□□□□□ -0.87
CDX2-201ENST00000381020 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.87
CDX2-201ENST00000381020 TEX29Q8N6K0 151 aa9.65□□□□□ -0.87
CDX2-201ENST00000381020 PEMTQ9UBM1 199 aa9.65□□□□□ -0.87
CDX2-201ENST00000381020 ZFHX4Q86UP3 3567 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 ZNF80P51504 273 aaPredicted RBP9.64□□□□□ -0.87
CDX2-201ENST00000381020 DEFB113Q30KQ7 82 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 SPOCK3Q9BQ16 436 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 NAA38Q9BRA0 125 aaKnown RBP9.64□□□□□ -0.87
CDX2-201ENST00000381020 KLK9Q9UKQ9 250 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 LRBAP50851 2863 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 IGHG2P01859 326 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 SRSF9Q13242 221 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDX2-201ENST00000381020 TCTEX1D4Q5JR98 221 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 C12orf54Q6X4T0 127 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms