RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 NDUFC1O43677 76 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 NTF4P34130 210 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 DSCR9P59020 149 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 WBP1Q96G27 269 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 CACNA1BQ00975 2339 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 YLPM1P49750 1951 aaKnown RBP8.65□□□□□ -1.02
CLCN4-202ENST00000380833 MRPL51Q4U2R6 128 aaKnown RBP8.65□□□□□ -1.02
CLCN4-202ENST00000380833 IGF2BP2-AS1Q96M15 143 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 SIRPDQ9H106 197 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 ESM1Q9NQ30 184 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 NDUFA12Q9UI09 145 aa8.65□□□□□ -1.02
CLCN4-202ENST00000380833 PRCDQ00LT1 54 aa8.65□□□□□ -1.03
CLCN4-202ENST00000380833 IGHV1-8P0DP01 117 aa8.65□□□□□ -1.03
CLCN4-202ENST00000380833 COX7CP15954 63 aa8.65□□□□□ -1.03
CLCN4-202ENST00000380833 SS18Q15532 418 aa8.65□□□□□ -1.03
CLCN4-202ENST00000380833 WNK3Q9BYP7 1800 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 TCF20Q9UGU0 1960 aaKnown RBP8.64□□□□□ -1.03
CLCN4-202ENST00000380833 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 RHPN1-AS1Q9BWJ2 59 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 LINC00271P0C7V0 271 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 IMUPQ9GZP8 106 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 SPTBN2O15020 2390 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 UBE2BP63146 152 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
CLCN4-202ENST00000380833 ZNF236Q9UL36 1845 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 LY75O60449 1722 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 UBE2E1P51965 193 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 TEX36Q5VZQ5 186 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 ZFP2Q6ZN57 461 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 CYYR1Q96J86 154 aa8.64□□□□□ -1.03
CLCN4-202ENST00000380833 TMEM213A2RRL7 107 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 SERP2Q8N6R1 65 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 COL11A1P12107 1806 aaPredicted RBP8.63□□□□□ -1.03
CLCN4-202ENST00000380833 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.63□□□□□ -1.03
CLCN4-202ENST00000380833 SPTA1P02549 2419 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 TMEM178BH3BS89 294 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 IGKV1-5P01602 117 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 Q8N1Y9 231 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 LYPD1Q8N2G4 141 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 FANCMQ8IYD8 2048 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 IGKV1D-8A0A087WSZ0 117 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 MRPL14Q6P1L8 145 aaKnown RBP8.63□□□□□ -1.03
CLCN4-202ENST00000380833 MYO7BQ6PIF6 2116 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 CEP250Q9BV73 2442 aa8.63□□□□□ -1.03
CLCN4-202ENST00000380833 E9PQ18 207 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 OVOL1O14753 267 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 RREB1Q92766 1687 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 DOCK7Q96N67 2140 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 MLANAQ16655 118 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 Q6ZQT7 251 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 ZNF726P1Q15940 193 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 ZNF497Q6ZNH5 498 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 C20orf204Q6ZNR8 217 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 TRAV23DV6A0A075B6W5 121 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 NTN3O00634 580 aaPredicted RBP8.62□□□□□ -1.03
CLCN4-202ENST00000380833 EFNA2O43921 213 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 IGKV1-39P01597 117 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 IGKV1D-39P04432 117 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 CHD3Q12873 2000 aaKnown RBP8.62□□□□□ -1.03
CLCN4-202ENST00000380833 COL4A5P29400 1685 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 RHODO00212 210 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 MRPS36P82909 103 aaKnown RBP8.62□□□□□ -1.03
CLCN4-202ENST00000380833 SERTAD4-AS1Q5TG53 156 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 EP300Q09472 2414 aaPredicted RBP8.62□□□□□ -1.03
CLCN4-202ENST00000380833 IL15RAQ13261 267 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 CD177Q8N6Q3 437 aa8.62□□□□□ -1.03
CLCN4-202ENST00000380833 ATAD5Q96QE3 1844 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 G3V318 75 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 IFI6P09912 130 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 RNF144BQ7Z419 303 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 TMEM75Q8N9X5 138 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 GBF1Q92538 1859 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 LOXL1Q08397 574 aaPredicted RBP8.61□□□□□ -1.03
CLCN4-202ENST00000380833 DEFB136Q30KP8 78 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 CSRP3P50461 194 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 Q6Q795 121 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 CACNA1DQ01668 2161 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 PDE6HQ13956 83 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 ASPHD1Q5U4P2 390 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 FANCD2OSQ96PS1 177 aa8.61□□□□□ -1.03
CLCN4-202ENST00000380833 CFPP27918 469 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 LINC01619G3V211 115 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 MSMBP08118 114 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 UBE2AP49459 152 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 WDR81Q562E7 1941 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 TRPM7Q96QT4 1865 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 PLA2G5P39877 138 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 LYPD6Q86Y78 171 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 A6NED7 52 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 RPL18AQ02543 176 aaKnown RBP8.6□□□□□ -1.03
CLCN4-202ENST00000380833 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
CLCN4-202ENST00000380833 ARAP2Q8WZ64 1704 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 K7EMI3 77 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms