RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.57
PRNP-201ENST00000379440 POLQO75417 2590 aa11.46□□□□□ -0.57
PRNP-201ENST00000379440 A6NDX4 124 aa11.46□□□□□ -0.58
PRNP-201ENST00000379440 CHEK1O14757 476 aa11.46□□□□□ -0.58
PRNP-201ENST00000379440 TRGV3P03979 118 aa11.46□□□□□ -0.58
PRNP-201ENST00000379440 COX6B1P14854 86 aa11.46□□□□□ -0.58
PRNP-201ENST00000379440 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.58
PRNP-201ENST00000379440 ATP5L2Q7Z4Y8 100 aa11.46□□□□□ -0.58
PRNP-201ENST00000379440 LRRK2Q5S007 2527 aa11.46□□□□□ -0.58
PRNP-201ENST00000379440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.45□□□□□ -0.582e-7■□□□□ 8.6
PRNP-201ENST00000379440 HBBP68871 147 aa11.45□□□□□ -0.58
PRNP-201ENST00000379440 RPL24P83731 157 aaKnown RBP11.45□□□□□ -0.58
PRNP-201ENST00000379440 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
PRNP-201ENST00000379440 CENPEQ02224 2701 aa11.45□□□□□ -0.58
PRNP-201ENST00000379440 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
PRNP-201ENST00000379440 TMEM190Q8WZ59 177 aa11.45□□□□□ -0.58
PRNP-201ENST00000379440 VGLL1Q99990 258 aa11.45□□□□□ -0.58
PRNP-201ENST00000379440 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
PRNP-201ENST00000379440 CRIP2P52943 208 aaPredicted RBP11.44□□□□□ -0.58
PRNP-201ENST00000379440 TSSC4Q9Y5U2 329 aaPredicted RBP11.44□□□□□ -0.58
PRNP-201ENST00000379440 A0A1W2PS18 150 aa11.44□□□□□ -0.58
PRNP-201ENST00000379440 DSCR9P59020 149 aa11.44□□□□□ -0.58
PRNP-201ENST00000379440 Q8TAT8 98 aa11.44□□□□□ -0.58
PRNP-201ENST00000379440 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
PRNP-201ENST00000379440 NPFFR1Q9GZQ6 430 aa11.44□□□□□ -0.58
PRNP-201ENST00000379440 YAE1D1Q9NRH1 226 aa11.44□□□□□ -0.58
PRNP-201ENST00000379440 UBR5O95071 2799 aaPredicted RBP11.44□□□□□ -0.58
PRNP-201ENST00000379440 CSPG4Q6UVK1 2322 aa11.44□□□□□ -0.58
PRNP-201ENST00000379440 FAM231BA6NCW3 169 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 TRBV12-3P01733 135 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 IGF1P05019 195 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 ID1P41134 155 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 RNF182Q8N6D2 247 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 KCNS1Q96KK3 526 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 MRPL16Q9NX20 251 aaKnown RBP11.43□□□□□ -0.58
PRNP-201ENST00000379440 J3QR89 54 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 IGLL1P15814 213 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 PMCHP20382 165 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 KRTAP10-9P60411 292 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 C7orf71A4D174 169 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
PRNP-201ENST00000379440 IGHG2P01859 326 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 EPG5Q9HCE0 2579 aa11.43□□□□□ -0.58
PRNP-201ENST00000379440 USP9YO00507 2555 aaPredicted RBP11.42□□□□□ -0.58
PRNP-201ENST00000379440 TMSB15BA0A087X1C1 80 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 FAM223BA6NKX1 122 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 SLC25A16P16260 332 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 PPIFP30405 207 aaKnown RBP11.42□□□□□ -0.58
PRNP-201ENST00000379440 LCNL1Q6ZST4 164 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 FAM223AQ8IWN6 122 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 FAM19A2Q8N3H0 131 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 A0A096LNT2 108 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 K7EP34 96 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 IGHV3-11P01762 117 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 PRR25Q96S07 402 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 METTL26Q96S19 204 aa11.42□□□□□ -0.58
PRNP-201ENST00000379440 ZNF324O75467 553 aaPredicted RBP11.41□□□□□ -0.58
PRNP-201ENST00000379440 ARMS2P0C7Q2 107 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
PRNP-201ENST00000379440 ERCC8Q13216 396 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 SMIM20Q8N5G0 67 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 TPPP3Q9BW30 176 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 GATA3P23771 443 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 RPL32P62910 135 aaKnown RBP11.41□□□□□ -0.58
PRNP-201ENST00000379440 GAGE5Q13069 117 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 GAGE6Q13070 117 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 LINC01356Q8N9X3 169 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 SPATA25Q9BR10 227 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 ST20Q9HBF5 79 aa11.41□□□□□ -0.58
PRNP-201ENST00000379440 A0A087X0K7 114 aa11.4□□□□□ -0.58
PRNP-201ENST00000379440 TEX48A0A1B0GUV7 120 aa11.4□□□□□ -0.58
PRNP-201ENST00000379440 SH2D1AO60880 128 aa11.4□□□□□ -0.58
PRNP-201ENST00000379440 TGFAP01135 160 aa11.4□□□□□ -0.58
PRNP-201ENST00000379440 ZNF80P51504 273 aaPredicted RBP11.4□□□□□ -0.58
PRNP-201ENST00000379440 OR5A1Q8NGJ0 315 aa11.4□□□□□ -0.58
PRNP-201ENST00000379440 HAX1O00165 279 aa11.4□□□□□ -0.59
PRNP-201ENST00000379440 UNQ9165/PRO28630Q6UXU0 137 aa11.4□□□□□ -0.59
PRNP-201ENST00000379440 OR2K2Q8NGT1 345 aa11.4□□□□□ -0.59
PRNP-201ENST00000379440 CITED2Q99967 270 aaPredicted RBP11.4□□□□□ -0.59
PRNP-201ENST00000379440 UFC1Q9Y3C8 167 aa11.4□□□□□ -0.59
PRNP-201ENST00000379440 SELENOKQ9Y6D0 94 aa11.4□□□□□ -0.59
PRNP-201ENST00000379440 NTF3P20783 257 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
PRNP-201ENST00000379440 DEFB112Q30KQ8 113 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 U3KQE9 123 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 ZANQ9Y493 2812 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 A0A1B0GUT8 65 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 IGHV4-59P01825 116 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 VCX2Q9H322 139 aa11.39□□□□□ -0.59
PRNP-201ENST00000379440 TRAV8-2A0A0B4J237 113 aa11.38□□□□□ -0.59
PRNP-201ENST00000379440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.38□□□□□ -0.59
PRNP-201ENST00000379440 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
PRNP-201ENST00000379440 FAM162BQ5T6X4 162 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms