RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TMEM219Q86XT9 240 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 WFDC3Q8IUB2 231 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 OR4X2Q8NGF9 303 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 RNASE8Q8TDE3 154 aaKnown RBP13.92□□□□□ -0.18
TDP2-202ENST00000378198 ITLN2Q8WWU7 325 aaPredicted RBP13.92□□□□□ -0.18
TDP2-202ENST00000378198 C16orf92Q96LL3 132 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 COL25A1Q9BXS0 654 aaPredicted RBP13.92□□□□□ -0.18
TDP2-202ENST00000378198 IGHV4-4A0A075B6R2 117 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 C7orf71A4D174 169 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 HSD52Q0P140 79 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 C9orf139Q6ZV77 190 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 OR2K2Q8NGT1 345 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 GLMPQ8WWB7 406 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 ZMAT4Q9H898 229 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 LENEPQ9Y5L5 61 aa13.92□□□□□ -0.18
TDP2-202ENST00000378198 A6NDN8 102 aa13.91□□□□□ -0.18
TDP2-202ENST00000378198 GATA1P15976 413 aaPredicted RBP13.91□□□□□ -0.18
TDP2-202ENST00000378198 IGLV2-18A0A075B6J9 118 aa13.91□□□□□ -0.18
TDP2-202ENST00000378198 TRGV3P03979 118 aa13.91□□□□□ -0.18
TDP2-202ENST00000378198 ARL3P36405 182 aa13.91□□□□□ -0.18
TDP2-202ENST00000378198 LY6DQ14210 128 aa13.91□□□□□ -0.18
TDP2-202ENST00000378198 IGHV1-69DA0A0B4J2H0 117 aa13.9□□□□□ -0.18
TDP2-202ENST00000378198 IGHV1-69P01742 117 aa13.9□□□□□ -0.18
TDP2-202ENST00000378198 ODF1Q14990 250 aa13.9□□□□□ -0.18
TDP2-202ENST00000378198 TMEM158Q8WZ71 300 aa13.9□□□□□ -0.18
TDP2-202ENST00000378198 ATP5LO75964 103 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 PRSS1P07477 247 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 NMUP48645 174 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 CEP295Q9C0D2 2601 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 SMPXQ9UHP9 88 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 TRAV8-6A0A0B4J262 113 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 H3BRM9 83 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 SPANXN1Q5VSR9 72 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 ADAMTSL5Q6ZMM2 481 aa13.89□□□□□ -0.19
TDP2-202ENST00000378198 C19orf84I3L1E1 186 aa13.88□□□□□ -0.19
TDP2-202ENST00000378198 IGHV4-39P01824 125 aa13.88□□□□□ -0.19
TDP2-202ENST00000378198 TCTAP57738 103 aa13.88□□□□□ -0.19
TDP2-202ENST00000378198 NRACQ8N912 160 aa13.88□□□□□ -0.19
TDP2-202ENST00000378198 MEGF9Q9H1U4 602 aa13.88□□□□□ -0.19
TDP2-202ENST00000378198 LINC00527Q9UJ94 153 aa13.88□□□□□ -0.19
TDP2-202ENST00000378198 NDUFA4O00483 81 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 UQCRFS1P47985 274 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 PCP2Q8IVA1 136 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 LINC00477Q96M19 166 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 SPTA1P02549 2419 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 IGHV3OR16-10A0A075B7F0 116 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 IGKCP01834 107 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 RBX1P62877 108 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 HHLA3Q9XRX5 114 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 UFC1Q9Y3C8 167 aa13.87□□□□□ -0.19
TDP2-202ENST00000378198 IGF1P05019 195 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 LAGE3Q14657 143 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 C20orf173Q96LM9 149 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 OVOL1O14753 267 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 BRI3O95415 125 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 SMIM17P0DL12 118 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 AP1S3Q96PC3 154 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 FOXC2Q99958 501 aa13.86□□□□□ -0.19
TDP2-202ENST00000378198 TRAV40A0A0B4J280 105 aa13.85□□□□□ -0.19
TDP2-202ENST00000378198 C9orf118A6NHY6 69 aa13.85□□□□□ -0.19
TDP2-202ENST00000378198 H3BUA1 57 aa13.85□□□□□ -0.19
TDP2-202ENST00000378198 PRR9Q5T870 116 aa13.85□□□□□ -0.19
TDP2-202ENST00000378198 Q6ZQT7 251 aa13.85□□□□□ -0.19
TDP2-202ENST00000378198 MYOZ3Q8TDC0 251 aa13.85□□□□□ -0.19
TDP2-202ENST00000378198 CSMD1Q96PZ7 3565 aa13.85□□□□□ -0.19
TDP2-202ENST00000378198 H3BVH4 76 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 DPM2O94777 84 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 BRD3OSQ6XYD6 125 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 OR10J6PQ8NGY7 276 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 USMG5Q96IX5 58 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 PIMREGQ9BSJ6 248 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 COL6A6A6NMZ7 2263 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 RELNP78509 3460 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 MED13LQ71F56 2210 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 CDKN1BP46527 198 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
TDP2-202ENST00000378198 UNQ9165/PRO28630Q6UXU0 137 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 GPHB5Q86YW7 130 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 HIGD1BQ9P298 99 aa13.84□□□□□ -0.19
TDP2-202ENST00000378198 TRAV26-2A0A0B4J265 109 aa13.83□□□□□ -0.2
TDP2-202ENST00000378198 TRAV21A0A0B4J279 112 aa13.83□□□□□ -0.2
TDP2-202ENST00000378198 SOCS3O14543 225 aa13.83□□□□□ -0.2
TDP2-202ENST00000378198 KIR3DS1Q14943 382 aa13.83□□□□□ -0.2
TDP2-202ENST00000378198 CST9LQ9H4G1 147 aa13.83□□□□□ -0.2
TDP2-202ENST00000378198 PRORYQ9H606 182 aa13.83□□□□□ -0.2
TDP2-202ENST00000378198 HIVEP3Q5T1R4 2406 aa13.82□□□□□ -0.2
TDP2-202ENST00000378198 GAGE10A6NGK3 116 aa13.82□□□□□ -0.2
TDP2-202ENST00000378198 TRBV12-3P01733 135 aa13.82□□□□□ -0.2
TDP2-202ENST00000378198 GNLYP22749 145 aa13.82□□□□□ -0.2
TDP2-202ENST00000378198 GTF2H5Q6ZYL4 71 aa13.82□□□□□ -0.2
TDP2-202ENST00000378198 ZFAND2AQ8N6M9 145 aa13.82□□□□□ -0.2
TDP2-202ENST00000378198 NBASA2RRP1 2371 aa13.82□□□□□ -0.2
TDP2-202ENST00000378198 IGKV2D-26A0A0A0MRZ7 120 aa13.81□□□□□ -0.2
TDP2-202ENST00000378198 IGHG2P01859 326 aa13.81□□□□□ -0.2
TDP2-202ENST00000378198 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
TDP2-202ENST00000378198 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
TDP2-202ENST00000378198 IGHV4-61A0A0C4DH41 118 aa13.81□□□□□ -0.2
TDP2-202ENST00000378198 GAGE12BA1L429 117 aa13.81□□□□□ -0.2
TDP2-202ENST00000378198 TMEM8BA6NDV4 472 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms