RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 A1L4Q6 167 aa10.79□□□□□ -0.68
MSH5-202ENST00000375740 ARMS2P0C7Q2 107 aa10.79□□□□□ -0.68
MSH5-202ENST00000375740 IFI27P40305 119 aaPredicted RBP10.79□□□□□ -0.68
MSH5-202ENST00000375740 EEF1AKMT3Q96AZ1 226 aa10.79□□□□□ -0.68
MSH5-202ENST00000375740 IGKV2-40A0A087WW87 121 aaPredicted RBP10.78□□□□□ -0.68
MSH5-202ENST00000375740 IGKV2D-40P01614 121 aaPredicted RBP10.78□□□□□ -0.68
MSH5-202ENST00000375740 HLA-DMBP28068 263 aa10.78□□□□□ -0.68
MSH5-202ENST00000375740 CACNG7P62955 275 aa10.78□□□□□ -0.68
MSH5-202ENST00000375740 PRSS3P2Q8NHM4 247 aa10.78□□□□□ -0.68
MSH5-202ENST00000375740 TTTY13Q9BZ97 58 aa10.78□□□□□ -0.68
MSH5-202ENST00000375740 TRAV41A0A0B4J266 112 aa10.78□□□□□ -0.68
MSH5-202ENST00000375740 SMAD7O15105 426 aaKnown RBP10.78□□□□□ -0.68
MSH5-202ENST00000375740 BMI1P35226 326 aa10.78□□□□□ -0.68
MSH5-202ENST00000375740 HSD52Q0P140 79 aa10.78□□□□□ -0.68
MSH5-202ENST00000375740 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
MSH5-202ENST00000375740 SERTM2A0A1B0GWG4 89 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 K7ERJ3 54 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 IGHG4P01861 327 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 NMUP48645 174 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 WFDC3Q8IUB2 231 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 NRGNQ92686 78 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 SIGMAR1Q99720 223 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 TRBV7-1A0A0A6YYK4 115 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 IGHV3-66A0A0C4DH42 116 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 HAX1O00165 279 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 BUB3O43684 328 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 ATP5G2Q06055 141 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 FA2HQ7L5A8 372 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 OR5A1Q8NGJ0 315 aa10.77□□□□□ -0.69
MSH5-202ENST00000375740 CLPSL1A2RUU4 121 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 PRB1P04280 392 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 SMIM17P0DL12 118 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 FABP2P12104 132 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 FXYD2P54710 66 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 LY6EQ16553 131 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 C19orf54Q5BKX5 351 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 SMPXQ9UHP9 88 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
MSH5-202ENST00000375740 MSMBP08118 114 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 VGLL1Q99990 258 aa10.76□□□□□ -0.69
MSH5-202ENST00000375740 COL12A1Q99715 3063 aa10.75□□□□□ -0.69
MSH5-202ENST00000375740 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
MSH5-202ENST00000375740 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
MSH5-202ENST00000375740 TPPP3Q9BW30 176 aa10.75□□□□□ -0.69
MSH5-202ENST00000375740 WFDC2Q14508 124 aa10.75□□□□□ -0.69
MSH5-202ENST00000375740 PRR25Q96S07 402 aa10.75□□□□□ -0.69
MSH5-202ENST00000375740 IGHV3-49A0A0A0MS15 119 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 A0A1B0GUT8 65 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 GAGE12HA6NDE8 117 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 H3BUX3 64 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 RAB9AP51151 201 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 FLNCQ14315 2725 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 SH2D1AO60880 128 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 GCSHP23434 173 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 CRIP2P52943 208 aaPredicted RBP10.74□□□□□ -0.69
MSH5-202ENST00000375740 Q8TAT8 98 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 DKK2Q9UBU2 259 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 DOPEY1Q5JWR5 2465 aa10.74□□□□□ -0.69
MSH5-202ENST00000375740 VPS13CQ709C8 3753 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 TRGV3P03979 118 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 SH2D6Q7Z4S9 175 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 SIGLEC8Q9NYZ4 499 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 TMSB15BA0A087X1C1 80 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 TMEM189A5PLL7 270 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 AVPP01185 164 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 RIGQ13278 110 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 COX8CQ7Z4L0 72 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 RNF182Q8N6D2 247 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 OR9G4Q8NGQ1 327 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 HIF1ANQ9NWT6 349 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 ACACBO00763 2458 aa10.73□□□□□ -0.69
MSH5-202ENST00000375740 A6NDX4 124 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 DPF1Q92782 380 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 METTL26Q96S19 204 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
MSH5-202ENST00000375740 TMEM238LA0A1B0GVL6 79 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 SMIM13P0DJ93 91 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
MSH5-202ENST00000375740 ERCC8Q13216 396 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
MSH5-202ENST00000375740 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 OR4X2Q8NGF9 303 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 SPG11Q96JI7 2443 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 ZFHX3Q15911 3703 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 CELSR1Q9NYQ6 3014 aa10.72□□□□□ -0.69
MSH5-202ENST00000375740 B4DSR2 109 aa10.71□□□□□ -0.69
MSH5-202ENST00000375740 D6R8Y8 96 aa10.71□□□□□ -0.69
MSH5-202ENST00000375740 IGF1P05019 195 aa10.71□□□□□ -0.69
MSH5-202ENST00000375740 BBC3Q96PG8 261 aaPredicted RBP10.71□□□□□ -0.69
MSH5-202ENST00000375740 BLCAPP62952 87 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms