RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 MIFP14174 115 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 NOVP48745 357 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 VPREB3Q9UKI3 123 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 FER1L4A9Z1Z3 1794 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 FN1P02751 2386 aaKnown RBP4.81□□□□□ -1.64
SCN2A-202ENST00000375427 C3orf36Q3SXR2 165 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 Q6Q795 121 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 ENHOQ6UWT2 76 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 RETNLBQ9BQ08 111 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 TM2D2Q9BX73 214 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 Q9H8V8 135 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 PDLIM7Q9NR12 457 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 A0A087WWL8 130 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 DEFB115Q30KQ5 88 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 AJUBAQ96IF1 538 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 C3P01024 1663 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 TRBV7-3A0A075B6L6 115 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 CCDC140Q96MF4 163 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 CLUHP3Q96NS8 147 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 LOC285556D6RIA3 1793 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 LAMB2P55268 1798 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 IGHV3-53P01767 116 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 ELNP15502 786 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 TANC1Q9C0D5 1861 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 WFDC2Q14508 124 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 ERCC6L2Q5T890 1561 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV2-40A0A087WW87 121 aaPredicted RBP4.8□□□□□ -1.64
SCN2A-202ENST00000375427 C2CD4DB7Z1M9 353 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 SHISA8B8ZZ34 492 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV2D-40P01614 121 aaPredicted RBP4.8□□□□□ -1.64
SCN2A-202ENST00000375427 C9orf139Q6ZV77 190 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 RNASE8Q8TDE3 154 aaKnown RBP4.8□□□□□ -1.64
SCN2A-202ENST00000375427 TMEM14CQ9P0S9 112 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 ZNF236Q9UL36 1845 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 PCOLCEQ15113 449 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 CRYGNQ8WXF5 182 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 ZFAND3Q9H8U3 227 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 Q9Y3F1 56 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 PRM2P04554 102 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 CTSGP08311 255 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 PAX9P55771 341 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 ZNF837Q96EG3 531 aaPredicted RBP4.8□□□□□ -1.64
SCN2A-202ENST00000375427 SLIT2O94813 1529 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 TRBV7-1A0A0A6YYK4 115 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 CD164L2Q6UWJ8 174 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 GPHA2Q96T91 129 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 KLF2Q9Y5W3 355 aaPredicted RBP4.8□□□□□ -1.64
SCN2A-202ENST00000375427 DLEC1Q9Y238 1755 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 IGHV1OR15-9A0A0B4J2B8 117 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 DEFB130BP0DP73 79 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 DEFB130AP0DP74 79 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 IGLL1P15814 213 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 ZNF525Q8N782 197 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 TMEM75Q8N9X5 138 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 PIFOQ8TCI5 191 aa4.8□□□□□ -1.64
SCN2A-202ENST00000375427 NUP188Q5SRE5 1749 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 COLCA1Q6ZS62 124 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 CSNK1G2-AS1Q8NCQ2 148 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 C5orf64Q2M2E5 130 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 V9GYV3 84 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 SMKR1H3BMG3 65 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 IGLC1P0CG04 106 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 TOMM6Q96B49 74 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 NUP210LQ5VU65 1888 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 NAV2Q8IVL1 2488 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 RGPD8O14715 1765 aaPredicted RBP4.79□□□□□ -1.64
SCN2A-202ENST00000375427 RGPD5Q99666 1765 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 LECT2O14960 151 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 MORN2Q502X0 79 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 LEAP2Q969E1 77 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 PMS2P5A8MQ11 134 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 RNASE3P12724 160 aaKnown RBP4.79□□□□□ -1.64
SCN2A-202ENST00000375427 XCL1P47992 114 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 SDHAF1A6NFY7 115 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 H3BS24 57 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 SBF2Q86WG5 1849 aa4.79□□□□□ -1.64
SCN2A-202ENST00000375427 ARHGEF28Q8N1W1 1705 aaKnown RBP4.79□□□□□ -1.64
SCN2A-202ENST00000375427 TRAV10A0A0B4J240 114 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 TMEM89A2RUT3 159 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 MSRB2Q9Y3D2 182 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 IGHV4-30-4P0DP06 118 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 IGHV4-31P0DP07 118 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 KLHDC9Q8NEP7 349 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 MCRIP2Q9BUT9 160 aaKnown RBP4.78□□□□□ -1.64
SCN2A-202ENST00000375427 ZNF252P-AS1Q0IIN9 211 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 DEFB121Q5J5C9 76 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 IFT172Q9UG01 1749 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 SAA4P35542 130 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 HGFACQ04756 655 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV2D-24A0A075B6R9 120 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 TRBV6-7A0A0A0MS04 114 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 IGHV2-5P01817 119 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 GYPEP15421 78 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 C15orf32Q32M92 178 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 MROH1Q8NDA8 1641 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 NLRC5Q86WI3 1866 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 A0A0U1RQS6 177 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV1-5P01602 117 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 MT-ATP8P03928 68 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms