RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 IGLC6P0CF74 106 aa13.62□□□□□ -0.23
HLA-DQB1-201ENST00000374943 S100A12P80511 92 aa13.62□□□□□ -0.23
HLA-DQB1-201ENST00000374943 ZNF575Q86XF7 245 aa13.62□□□□□ -0.23
HLA-DQB1-201ENST00000374943 KLHDC1Q8N7A1 406 aa13.62□□□□□ -0.23
HLA-DQB1-201ENST00000374943 SONP18583 2426 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-201ENST00000374943 FAM181BA6NEQ2 426 aa13.61□□□□□ -0.23
HLA-DQB1-201ENST00000374943 EDN2P20800 178 aa13.61□□□□□ -0.23
HLA-DQB1-201ENST00000374943 RPL11P62913 178 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-201ENST00000374943 OR10J6PQ8NGY7 276 aa13.61□□□□□ -0.23
HLA-DQB1-201ENST00000374943 KCNS1Q96KK3 526 aa13.61□□□□□ -0.23
HLA-DQB1-201ENST00000374943 TMSB15BA0A087X1C1 80 aa13.6□□□□□ -0.23
HLA-DQB1-201ENST00000374943 LOC102724200A0A096LPH7 203 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB1-201ENST00000374943 LYZL1Q6UWQ5 148 aa13.6□□□□□ -0.23
HLA-DQB1-201ENST00000374943 ZNF493Q6ZR52 646 aa13.6□□□□□ -0.23
HLA-DQB1-201ENST00000374943 YAE1D1Q9NRH1 226 aa13.6□□□□□ -0.23
HLA-DQB1-201ENST00000374943 TRBV7-9A0A0J9YWB2 115 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 HOXD3P31249 432 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 Q6ZSV7 163 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 FER1L6-AS1Q8NA97 138 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 DCANP1Q8TF63 244 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 RCHY1Q96PM5 261 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 ORM1P02763 201 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 ID1P41134 155 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 FAM19A4Q96LR4 140 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 CNFNQ9BYD5 112 aa13.59□□□□□ -0.23
HLA-DQB1-201ENST00000374943 SYNJ2BPP57105 145 aa13.58□□□□□ -0.24
HLA-DQB1-201ENST00000374943 SCGB2A2Q13296 93 aa13.58□□□□□ -0.24
HLA-DQB1-201ENST00000374943 OR8A1Q8NGG7 326 aa13.58□□□□□ -0.24
HLA-DQB1-201ENST00000374943 C4orf3Q8WVX3 66 aa13.58□□□□□ -0.24
HLA-DQB1-201ENST00000374943 TPPP3Q9BW30 176 aa13.58□□□□□ -0.24
HLA-DQB1-201ENST00000374943 TMEM160Q9NX00 188 aa13.58□□□□□ -0.24
HLA-DQB1-201ENST00000374943 ANK3Q12955 4377 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-201ENST00000374943 PCP4L1A6NKN8 68 aa13.57□□□□□ -0.24
HLA-DQB1-201ENST00000374943 IQCJQ1A5X6 159 aa13.57□□□□□ -0.24
HLA-DQB1-201ENST00000374943 CDPF1Q6NVV7 123 aa13.57□□□□□ -0.24
HLA-DQB1-201ENST00000374943 ESM1Q9NQ30 184 aa13.57□□□□□ -0.24
HLA-DQB1-201ENST00000374943 GPX1P07203 203 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 APRG1Q8IVJ8 170 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 ZFAND2AQ8N6M9 145 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 WFDC12Q8WWY7 111 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 SAMD10Q9BYL1 202 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 IGKV3-7A0A075B6H7 116 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 IGKV3D-20A0A0C4DH25 116 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 C2orf70A6NJV1 201 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 ZNF705DP0CH99 300 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 ZNF705BP0CI00 300 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 TCTEX1D4Q5JR98 221 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 DMRTA1Q5VZB9 504 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 MS4A6AQ9H2W1 248 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 GSN-AS1Q9NRJ2 163 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 C11orf21Q9P2W6 132 aa13.56□□□□□ -0.24
HLA-DQB1-201ENST00000374943 ACANP16112 2415 aa13.55□□□□□ -0.24
HLA-DQB1-201ENST00000374943 LINC01619G3V211 115 aa13.55□□□□□ -0.24
HLA-DQB1-201ENST00000374943 ZNF324O75467 553 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-201ENST00000374943 PRR9Q5T870 116 aa13.55□□□□□ -0.24
HLA-DQB1-201ENST00000374943 SRD5A1P18405 259 aa13.54□□□□□ -0.24
HLA-DQB1-201ENST00000374943 C18orf65Q6ZTR6 163 aa13.54□□□□□ -0.24
HLA-DQB1-201ENST00000374943 Q6ZWC4 215 aa13.54□□□□□ -0.24
HLA-DQB1-201ENST00000374943 K7EQG2 157 aa13.53□□□□□ -0.24
HLA-DQB1-201ENST00000374943 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-201ENST00000374943 AMTP48728 403 aa13.53□□□□□ -0.24
HLA-DQB1-201ENST00000374943 PRR31Q5SQ13 230 aa13.53□□□□□ -0.24
HLA-DQB1-201ENST00000374943 M0QZ24 198 aa13.53□□□□□ -0.24
HLA-DQB1-201ENST00000374943 DEFB1P60022 68 aa13.53□□□□□ -0.24
HLA-DQB1-201ENST00000374943 FAM104BQ5XKR9 115 aa13.53□□□□□ -0.24
HLA-DQB1-201ENST00000374943 TRAV21A0A0B4J279 112 aa13.52□□□□□ -0.25
HLA-DQB1-201ENST00000374943 F6UB75 175 aa13.52□□□□□ -0.25
HLA-DQB1-201ENST00000374943 SLURP1P55000 103 aa13.52□□□□□ -0.25
HLA-DQB1-201ENST00000374943 URB1-AS1Q96HZ7 61 aa13.52□□□□□ -0.25
HLA-DQB1-201ENST00000374943 SELENOKQ9Y6D0 94 aa13.52□□□□□ -0.25
HLA-DQB1-201ENST00000374943 U3KQK5 164 aa13.52□□□□□ -0.25
HLA-DQB1-201ENST00000374943 HIVEP1P15822 2718 aa13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 PMCHP20382 165 aa13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 DEFB136Q30KP8 78 aa13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 OR1N2Q8NGR9 330 aa13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 CHCHD1Q96BP2 118 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 ODF3Q96PU9 254 aa13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 TMEM191AQ9H0A3 160 aa13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 C16orf95Q9H693 158 aa13.51□□□□□ -0.25
HLA-DQB1-201ENST00000374943 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 NTF3P20783 257 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 TWIST1Q15672 202 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 ADAMTSL5Q6ZMM2 481 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 NIT1Q86X76 327 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 WFDC3Q8IUB2 231 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 OR11H1Q8NG94 326 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 DPF1Q92782 380 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 PEMTQ9UBM1 199 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 SNAI2O43623 268 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 HSBP1O75506 76 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 KLHL30-AS1Q8NEE0 82 aa13.5□□□□□ -0.25
HLA-DQB1-201ENST00000374943 KLLNB2CW77 178 aa13.49□□□□□ -0.25
HLA-DQB1-201ENST00000374943 NAGKQ9UJ70 344 aa13.49□□□□□ -0.25
HLA-DQB1-201ENST00000374943 IGHV4-4A0A075B6R2 117 aa13.48□□□□□ -0.25
HLA-DQB1-201ENST00000374943 ZNF688P0C7X2 276 aa13.48□□□□□ -0.25
HLA-DQB1-201ENST00000374943 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
HLA-DQB1-201ENST00000374943 Q6ZQT7 251 aa13.48□□□□□ -0.25
HLA-DQB1-201ENST00000374943 AMN1Q8IY45 258 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms