RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 IGHV3OR15-7A0A075B7D8 119 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 TRAV8-1A0A0A6YYK1 113 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 A8MWV9 139 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 HOXB4P17483 251 aaPredicted RBP6.47□□□□□ -1.37
GARNL3-201ENST00000373386 FOXC1Q12948 553 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 CDSNQ15517 529 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 FAM120AOSQ5T036 256 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 HIGD1BQ9P298 99 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 SPRY3O43610 288 aa6.46□□□□□ -1.37
GARNL3-201ENST00000373386 NDUFA4L2Q9NRX3 87 aa6.46□□□□□ -1.37
GARNL3-201ENST00000373386 TRBV7-7A0A0K0K1E9 115 aa6.46□□□□□ -1.38
GARNL3-201ENST00000373386 COX7CP15954 63 aa6.46□□□□□ -1.38
GARNL3-201ENST00000373386 ZNF493Q6ZR52 646 aa6.46□□□□□ -1.38
GARNL3-201ENST00000373386 PDPNQ86YL7 162 aa6.46□□□□□ -1.38
GARNL3-201ENST00000373386 CHCHD1Q96BP2 118 aaKnown RBP6.46□□□□□ -1.38
GARNL3-201ENST00000373386 MRPL20Q9BYC9 149 aaKnown RBP6.46□□□□□ -1.38
GARNL3-201ENST00000373386 DMXL2Q8TDJ6 3036 aa6.46□□□□□ -1.38
GARNL3-201ENST00000373386 RAI1Q7Z5J4 1906 aaPredicted RBP6.46□□□□□ -1.38
GARNL3-201ENST00000373386 AHCTF1Q8WYP5 2266 aa6.46□□□□□ -1.38
GARNL3-201ENST00000373386 TRAV2A0A0B4J234 112 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 UBE2L3P68036 154 aaKnown RBP6.45□□□□□ -1.38
GARNL3-201ENST00000373386 TMEM167AQ8TBQ9 72 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 LEAP2Q969E1 77 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 KAAG1Q9UBP8 84 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 IGKV1OR2-108A0A075B7D4 117 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 ELANEP08246 267 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 RNASE2P10153 161 aaKnown RBP6.45□□□□□ -1.38
GARNL3-201ENST00000373386 FAM19A4Q96LR4 140 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 SPENQ96T58 3664 aaKnown RBP6.45□□□□□ -1.38
GARNL3-201ENST00000373386 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 C11orf44Q8N8P7 122 aa6.45□□□□□ -1.38
GARNL3-201ENST00000373386 SPTBN2O15020 2390 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 C17orf100A8MU93 164 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 SCGB1C2P0DMR2 95 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 COL8A2P25067 703 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 VMA21Q3ZAQ7 101 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 THAP8Q8NA92 274 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 SLC25A2Q9BXI2 301 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 IGHV1-24A0A0C4DH33 117 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 ERHP84090 104 aaKnown RBP6.44□□□□□ -1.38
GARNL3-201ENST00000373386 ATP5L2Q7Z4Y8 100 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 ZCCHC24Q8N2G6 241 aaKnown RBP6.44□□□□□ -1.38
GARNL3-201ENST00000373386 FAM167A-AS1Q96KT0 104 aa6.44□□□□□ -1.38
GARNL3-201ENST00000373386 AMMECR1Q9Y4X0 333 aaPredicted RBP6.44□□□□□ -1.38
GARNL3-201ENST00000373386 TRAV8-4A0A0B4J246 113 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 SAA1P0DJI8 122 aaPredicted RBP6.43□□□□□ -1.38
GARNL3-201ENST00000373386 GRNP28799 593 aaKnown RBP6.43□□□□□ -1.38
GARNL3-201ENST00000373386 SUB1P53999 127 aaKnown RBP eCLIP6.43□□□□□ -1.38
GARNL3-201ENST00000373386 EBI3Q14213 229 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 LINC01561Q8N1V8 128 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 SRRM4A7MD48 611 aaKnown RBP6.43□□□□□ -1.38
GARNL3-201ENST00000373386 C16orf97H3BN30 126 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 PEX7O00628 323 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 HLA-DRB4P13762 266 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
GARNL3-201ENST00000373386 MFAP2P55001 183 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 WFDC3Q8IUB2 231 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 SBSPONQ8IVN8 264 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 SPACA3Q8IXA5 215 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 CCL13Q99616 98 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 AGPAT4-IT1Q9H0P7 198 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 ZNF256Q9Y2P7 627 aaPredicted RBP6.43□□□□□ -1.38
GARNL3-201ENST00000373386 HLA-DRB4X5D2U9 266 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 DSCAMO60469 2012 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 COX7A2P2O60397 106 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 NDUFS7O75251 213 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 DLX1P56177 255 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 PSMG4Q5JS54 123 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 ZNF329Q86UD4 541 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 C1orf158Q8N1D5 194 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 NPIPB3Q92617 1050 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 ODF3Q96PU9 254 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 PAXXQ9BUH6 204 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 ZNF355PQ9NSJ1 428 aa6.43□□□□□ -1.38
GARNL3-201ENST00000373386 TCRBV4S1A1TA0A5B7 111 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 P01737 135 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 IGKV1-16P04430 117 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 PSMB8P28062 276 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 C12orf74Q32Q52 190 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 C10orf113Q5VZT2 155 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 FAM216BQ8N7L0 139 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 FAM168AQ92567 244 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 INTS1Q8N201 2190 aaKnown RBP6.42□□□□□ -1.38
GARNL3-201ENST00000373386 LINC00482Q8N8I6 264 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 CHAC1Q9BUX1 264 aa6.42□□□□□ -1.38
GARNL3-201ENST00000373386 IGLV2-23P01705 113 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 MRPL55Q7Z7F7 128 aaKnown RBP6.41□□□□□ -1.38
GARNL3-201ENST00000373386 GTSCR1Q86UQ5 136 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 SHANK2-AS3Q9BTD1 123 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 BOD1L1Q8NFC6 3051 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 SPTBN4Q9H254 2564 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 HAX1O00165 279 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 PRRG2O14669 202 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 IGKCP01834 107 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 MLANAQ16655 118 aa6.41□□□□□ -1.38
GARNL3-201ENST00000373386 MORN5Q5VZ52 161 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms