RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 F8W1H4 67 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 DKK4Q9UBT3 224 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 IGKV3-20P01619 116 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 LOXP28300 417 aaPredicted RBP8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 LAGE3Q14657 143 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 ODF1Q14990 250 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 PHLDA3Q9Y5J5 127 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 WNK1Q9H4A3 2382 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 IGLV3-9A0A075B6K5 115 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 IGHV4-39P01824 125 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 SLC25A16P16260 332 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 C16orf54Q6UWD8 224 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 CLEC19AQ6UXS0 136 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 LINC01560Q8TB33 94 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 TECTAO75443 2155 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 ANKRD11Q6UB99 2663 aaPredicted RBP8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 COL27A1Q8IZC6 1860 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 B5MCH6 92 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 DEFB1P60022 68 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 ZNF562Q6V9R5 426 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 C16orf92Q96LL3 132 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 PTPN13Q12923 2485 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 CR1LQ2VPA4 569 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 SPANXB1Q9NS25 103 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 SETD2Q9BYW2 2564 aaPredicted RBP8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 IGHV3OR16-10A0A075B7F0 116 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 SRD5A1P18405 259 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 NPC2P61916 151 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 C3orf56Q8N813 242 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 LAMA5O15230 3695 aa8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 SPENQ96T58 3664 aaKnown RBP8.16□□□□□ -1.1
PRPF38B-201ENST00000370021 MT-ATP8P03928 68 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 CD59P13987 128 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 PIP4P2Q8N4L2 257 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 DEFB123Q8N688 67 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 TMEM238LA0A1B0GVL6 79 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 A6NJY4 79 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 BUB1B-PAK6H3BSN5 160 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 SRSF1Q07955 248 aaKnown RBP eCLIP8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 RNASE6Q93091 150 aaKnown RBP8.15□□□□□ -1.1
PRPF38B-201ENST00000370021 TTC32Q5I0X7 151 aa8.15□□□□□ -1.11
PRPF38B-201ENST00000370021 Q6ZQT7 251 aa8.15□□□□□ -1.11
PRPF38B-201ENST00000370021 SEM1Q6ZVN7 128 aa8.15□□□□□ -1.11
PRPF38B-201ENST00000370021 ZNF256Q9Y2P7 627 aaPredicted RBP8.15□□□□□ -1.11
PRPF38B-201ENST00000370021 PRSS29PA6NIE9 313 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 SIVA1O15304 175 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 NBR2O15453 112 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 TEX29Q8N6K0 151 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 DLX4Q92988 240 aaPredicted RBP8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 FSTL3O95633 263 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 IGHG3P01860 377 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 CFHR4Q92496 578 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 PRADC1Q9BSG0 188 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 H3BRN7 92 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 K7EIM0 57 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 PVRIGQ6DKI7 326 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 ASCL5Q7RTU5 278 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 MRAP2Q96G30 205 aa8.14□□□□□ -1.11
PRPF38B-201ENST00000370021 TRAV2A0A0B4J234 112 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 I3L2K1 104 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 TEX36Q5VZQ5 186 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 C9JAW5 83 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 KIR2DL4Q99706 377 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 CUL9Q8IWT3 2517 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 RNF183Q96D59 192 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 DPM3Q9P2X0 92 aa8.13□□□□□ -1.11
PRPF38B-201ENST00000370021 DMXL1Q9Y485 3027 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 A8MWV9 139 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 K7EM74 188 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 GATA4P43694 442 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 FAM215AQ9Y5M1 114 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 TEX22C9J3V5 150 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 SNCGO76070 127 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 C15orf32Q32M92 178 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 TMEM30BQ3MIR4 351 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 TMEM155Q4W5P6 130 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 RAB1BQ9H0U4 201 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 UBTD1Q9HAC8 227 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 OTOGLQ3ZCN5 2332 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 PCSK5Q92824 1860 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 MYMXA0A1B0GTQ4 84 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 RNASE4P34096 147 aaKnown RBP8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 RPL39LQ96EH5 51 aaKnown RBP8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 SPRY4Q9C004 299 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 TMEM14CQ9P0S9 112 aa8.12□□□□□ -1.11
PRPF38B-201ENST00000370021 SONP18583 2426 aaKnown RBP8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 IGF2RP11717 2491 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 A0A0U1RRA0 63 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 H7C1H1 209 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 CRYGCP07315 174 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 HERVK_113P61574 105 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms