RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 IGHG4P01861 327 aa10.02□□□□□ -0.81
CHD1L-202ENST00000369258 RPL24P83731 157 aaKnown RBP10.02□□□□□ -0.81
CHD1L-202ENST00000369258 ECSCRQ19T08 205 aa10.02□□□□□ -0.81
CHD1L-202ENST00000369258 NIPBLQ6KC79 2804 aaeCLIP10.01□□□□□ -0.81
CHD1L-202ENST00000369258 IGHV3OR16-10A0A075B7F0 116 aa10.01□□□□□ -0.81
CHD1L-202ENST00000369258 IL17RELQ6ZVW7 336 aa10.01□□□□□ -0.81
CHD1L-202ENST00000369258 FXYD2P54710 66 aa10.01□□□□□ -0.81
CHD1L-202ENST00000369258 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
CHD1L-202ENST00000369258 LY6LH3BQJ8 138 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 IGF1P05019 195 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 IGLC6P0CF74 106 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 FBN2P35556 2912 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 C2CD3Q4AC94 2353 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 G3V318 75 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 FCER1GP30273 86 aa10□□□□□ -0.81
CHD1L-202ENST00000369258 ODF1Q14990 250 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 RNF185Q96GF1 192 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 FOXC2Q99958 501 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 C11orf21Q9P2W6 132 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 CFAP46Q8IYW2 2715 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 TNFRSF6BO95407 300 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 CD3EP07766 207 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 COX8CQ7Z4L0 72 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 NXT2Q9NPJ8 142 aaKnown RBP9.99□□□□□ -0.81
CHD1L-202ENST00000369258 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 UFC1Q9Y3C8 167 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 ZFYVE26Q68DK2 2539 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 IGKCP01834 107 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 EFNA4P52798 201 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 PSMG4Q5JS54 123 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 TMEM160Q9NX00 188 aa9.99□□□□□ -0.81
CHD1L-202ENST00000369258 MYO9AB2RTY4 2548 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 CACNA1AO00555 2505 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 IGLV11-55A0A075B6I3 123 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 B9A039 149 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 ZNF562Q6V9R5 426 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 HHLA3Q9XRX5 114 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 FABP5P3A8MUU1 101 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 CCL21O00585 134 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 CTSGP08311 255 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 C5orf64Q2M2E5 130 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 WFDC12Q8WWY7 111 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 CFHR4Q92496 578 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 HIGD1BQ9P298 99 aa9.98□□□□□ -0.81
CHD1L-202ENST00000369258 USP9XQ93008 2570 aaPredicted RBP9.98□□□□□ -0.81
CHD1L-202ENST00000369258 MYO18BQ8IUG5 2567 aa9.97□□□□□ -0.81
CHD1L-202ENST00000369258 PIFOQ8TCI5 191 aa9.97□□□□□ -0.81
CHD1L-202ENST00000369258 TMEM158Q8WZ71 300 aa9.97□□□□□ -0.81
CHD1L-202ENST00000369258 NHP2Q9NX24 153 aaKnown RBP9.97□□□□□ -0.81
CHD1L-202ENST00000369258 CLEC3BP05452 202 aa9.97□□□□□ -0.81
CHD1L-202ENST00000369258 ZC2HC1BQ5TFG8 222 aa9.97□□□□□ -0.81
CHD1L-202ENST00000369258 ARPC1AQ92747 370 aa9.97□□□□□ -0.81
CHD1L-202ENST00000369258 MXRA5Q9NR99 2828 aa9.97□□□□□ -0.81
CHD1L-202ENST00000369258 TRBV25-1A0A075B6N4 114 aa9.96□□□□□ -0.81
CHD1L-202ENST00000369258 DPM2O94777 84 aa9.96□□□□□ -0.81
CHD1L-202ENST00000369258 SMIM17P0DL12 118 aa9.96□□□□□ -0.81
CHD1L-202ENST00000369258 AMTNQ6UX39 209 aa9.96□□□□□ -0.81
CHD1L-202ENST00000369258 ZMAT4Q9H898 229 aa9.96□□□□□ -0.81
CHD1L-202ENST00000369258 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.82
CHD1L-202ENST00000369258 NPBQ8NG41 125 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 TEX48A0A1B0GUV7 120 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 TMEM8BA6NDV4 472 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 NDUFA3O95167 84 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 CEACAM3P40198 252 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 C15orf32Q32M92 178 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 CLEC19AQ6UXS0 136 aa9.96□□□□□ -0.82
CHD1L-202ENST00000369258 ZNF48Q96MX3 618 aaPredicted RBP9.96□□□□□ -0.82
CHD1L-202ENST00000369258 ATP5LO75964 103 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 IGF2-ASQ6U949 168 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 DTX2Q86UW9 622 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 MAPKAPK5-AS1Q8N8E1 139 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 NF1P21359 2839 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 ABCA2Q9BZC7 2435 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 FOXC1Q12948 553 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 GLMPQ8WWB7 406 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 SMPXQ9UHP9 88 aa9.95□□□□□ -0.82
CHD1L-202ENST00000369258 NACAE9PAV3 2078 aa9.94□□□□□ -0.82
CHD1L-202ENST00000369258 CEND1Q8N111 149 aa9.94□□□□□ -0.82
CHD1L-202ENST00000369258 PTPN13Q12923 2485 aa9.94□□□□□ -0.82
CHD1L-202ENST00000369258 IGKV3D-20A0A0C4DH25 116 aa9.94□□□□□ -0.82
CHD1L-202ENST00000369258 LINC01546A6NGU7 62 aa9.94□□□□□ -0.82
CHD1L-202ENST00000369258 SRSF2Q01130 221 aaKnown RBP9.94□□□□□ -0.82
CHD1L-202ENST00000369258 Q8N8P6 123 aa9.94□□□□□ -0.82
CHD1L-202ENST00000369258 EMP1P54849 157 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 VMO1Q7Z5L0 202 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 TTC9CQ8N5M4 171 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 FAM208BQ5VWN6 2430 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 SAMD13Q5VXD3 122 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 OR11H6Q8NGC7 330 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
CHD1L-202ENST00000369258 A0A1W2PPR1 153 aa9.93□□□□□ -0.82
CHD1L-202ENST00000369258 TM2D2Q9BX73 214 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms