RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZNF415Q09FC8 603 aa10.93□□□□□ -0.66
CKS1B-202ENST00000368436 LINC00299Q6ZSB3 139 aa10.93□□□□□ -0.66
CKS1B-202ENST00000368436 PHYHIPLQ96FC7 376 aa10.93□□□□□ -0.66
CKS1B-202ENST00000368436 NMES1Q9C002 83 aa10.93□□□□□ -0.66
CKS1B-202ENST00000368436 WDR61Q9GZS3 305 aaKnown RBP10.93□□□□□ -0.66
CKS1B-202ENST00000368436 KCNIP2Q9NS61 270 aa10.93□□□□□ -0.66
CKS1B-202ENST00000368436 PGPEP1Q9NXJ5 209 aa10.93□□□□□ -0.66
CKS1B-202ENST00000368436 OR5AC2Q9NZP5 309 aa10.93□□□□□ -0.66
CKS1B-202ENST00000368436 RBAKDNA6NC62 111 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 H0YIZ8 118 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 PRAF2O60831 178 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 SIX6O95475 246 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 OR10J4P0C629 311 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 ASAH1Q13510 395 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 ZNF266Q14584 549 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 MRPL23Q16540 153 aaKnown RBP10.92□□□□□ -0.66
CKS1B-202ENST00000368436 IQCF2Q8IXL9 164 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 LYPD1Q8N2G4 141 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 Q8TAT8 98 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 C8orf49Q96NF6 230 aa10.92□□□□□ -0.66
CKS1B-202ENST00000368436 NEGR1Q7Z3B1 354 aa10.91□□□□□ -0.66
CKS1B-202ENST00000368436 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
CKS1B-202ENST00000368436 TNFRSF18Q9Y5U5 241 aa10.91□□□□□ -0.66
CKS1B-202ENST00000368436 C17orf112F2Z3M2 114 aa10.9□□□□□ -0.66
CKS1B-202ENST00000368436 CSN1S1P47710 185 aa10.9□□□□□ -0.66
CKS1B-202ENST00000368436 RANP62826 216 aaKnown RBP10.9□□□□□ -0.66
CKS1B-202ENST00000368436 NFE4Q86UQ8 179 aa10.9□□□□□ -0.66
CKS1B-202ENST00000368436 RASL10AQ92737 203 aa10.9□□□□□ -0.66
CKS1B-202ENST00000368436 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.66
CKS1B-202ENST00000368436 EREGO14944 169 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 OR7C2O60412 319 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 ERVFC1-1P60608 527 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 CYCSP99999 105 aaKnown RBP10.89□□□□□ -0.67
CKS1B-202ENST00000368436 LRRC37A5PQ49AS3 106 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 MUC21Q5SSG8 566 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 Q6AWC8 147 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 CDPF1Q6NVV7 123 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 OR10G4Q8NGN3 311 aa10.89□□□□□ -0.67
CKS1B-202ENST00000368436 TRAV9-2A0A087WT02 112 aa10.88□□□□□ -0.67
CKS1B-202ENST00000368436 TRGV4A0A0C4DH28 118 aa10.88□□□□□ -0.67
CKS1B-202ENST00000368436 DIRC3C9JPN6 131 aa10.88□□□□□ -0.67
CKS1B-202ENST00000368436 K7EQD1 137 aa10.88□□□□□ -0.67
CKS1B-202ENST00000368436 S100ZQ8WXG8 99 aa10.88□□□□□ -0.67
CKS1B-202ENST00000368436 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
CKS1B-202ENST00000368436 SPXQ9BT56 116 aa10.88□□□□□ -0.67
CKS1B-202ENST00000368436 K7EP13 123 aa10.87□□□□□ -0.67
CKS1B-202ENST00000368436 SFTA3P0C7M3 94 aa10.87□□□□□ -0.67
CKS1B-202ENST00000368436 UBE2L3P68036 154 aaKnown RBP10.87□□□□□ -0.67
CKS1B-202ENST00000368436 ENKURQ8TC29 256 aa10.87□□□□□ -0.67
CKS1B-202ENST00000368436 TMED6Q8WW62 240 aa10.87□□□□□ -0.67
CKS1B-202ENST00000368436 ATP5SQ99766 215 aa10.87□□□□□ -0.67
CKS1B-202ENST00000368436 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
CKS1B-202ENST00000368436 TRGV11A0A075B6L2 103 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 A0A087WTM6 91 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 SRIP30626 198 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 FUSP35637 526 aaKnown RBP eCLIP10.86□□□□□ -0.67
CKS1B-202ENST00000368436 XGP55808 180 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 H2BFSP57053 126 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 TMEM183BQ1AE95 376 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 TDRG1Q3Y452 100 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 KHDC3LQ587J8 217 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 FFAR4Q5NUL3 377 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 FAM159AQ6UWV7 190 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 TMEM183AQ8IXX5 376 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 HSPB11Q9Y547 144 aa10.86□□□□□ -0.67
CKS1B-202ENST00000368436 EPM2AB3EWF7 344 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 UPK1BO75841 260 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 ORM1P02763 201 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 DNAH10OSP0CZ25 163 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 GYPEP15421 78 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 TAS2R45P59539 299 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 WFDC10BQ8IUB3 73 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 PPP1R1CQ8WVI7 109 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 PTTG2Q9NZH5 202 aa10.85□□□□□ -0.67
CKS1B-202ENST00000368436 INMT-MINDY4F8WBC2 141 aa10.84□□□□□ -0.67
CKS1B-202ENST00000368436 IFITM3Q01628 133 aa10.84□□□□□ -0.67
CKS1B-202ENST00000368436 PCNPQ8WW12 178 aaKnown RBP10.84□□□□□ -0.67
CKS1B-202ENST00000368436 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
CKS1B-202ENST00000368436 MSRB1Q9NZV6 116 aa10.84□□□□□ -0.67
CKS1B-202ENST00000368436 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
CKS1B-202ENST00000368436 MPC2O95563 127 aa10.83□□□□□ -0.68
CKS1B-202ENST00000368436 EVI2AP22794 236 aa10.83□□□□□ -0.68
CKS1B-202ENST00000368436 ARL6IP6Q8N6S5 226 aa10.83□□□□□ -0.68
CKS1B-202ENST00000368436 SCGB1C1Q8TD33 95 aa10.83□□□□□ -0.68
CKS1B-202ENST00000368436 HYLS1Q96M11 299 aa10.83□□□□□ -0.68
CKS1B-202ENST00000368436 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 PGPA6NDG6 321 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 C9JCJ5 164 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 M0R2P5 195 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 GNRH2O43555 120 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 IFNA5P01569 189 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 KRTAP10-1P60331 282 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 OR4C5Q8NGB2 326 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 TXNDC17Q9BRA2 123 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 MARVELD1Q9BSK0 173 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
CKS1B-202ENST00000368436 EIF3GO75821 320 aaKnown RBP eCLIP10.81□□□□□ -0.682e-6■■■■■ 29.6
CKS1B-202ENST00000368436 PET100P0DJ07 73 aa10.81□□□□□ -0.68
CKS1B-202ENST00000368436 RPL12P30050 165 aaKnown RBP10.81□□□□□ -0.68
CKS1B-202ENST00000368436 FAM74A1Q5RGS3 127 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms