RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 IGHV7-4-1A0A0J9YVY3 117 aa10.94□□□□□ -0.66
CD48-201ENST00000368045 H3BRM9 83 aa10.94□□□□□ -0.66
CD48-201ENST00000368045 H3BUA1 57 aa10.94□□□□□ -0.66
CD48-201ENST00000368045 IGHV1-69P01742 117 aa10.94□□□□□ -0.66
CD48-201ENST00000368045 ODF1Q14990 250 aa10.94□□□□□ -0.66
CD48-201ENST00000368045 C16orf92Q96LL3 132 aa10.94□□□□□ -0.66
CD48-201ENST00000368045 ZNF207O43670 478 aaKnown RBP10.93□□□□□ -0.66
CD48-201ENST00000368045 PPIFP30405 207 aaKnown RBP10.93□□□□□ -0.66
CD48-201ENST00000368045 AMMECR1LQ6DCA0 310 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 MEGF9Q9H1U4 602 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 DKK2Q9UBU2 259 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 IGHV3OR16-13A0A075B7E8 117 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 IGHV3-74A0A0B4J1X5 117 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 NDUFA4O00483 81 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 OVOL1O14753 267 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 TRGV3P03979 118 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 IGF1P05019 195 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 HLA-DRB4P13762 266 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 EVI2AP22794 236 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 ARL3P36405 182 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 RNASE8Q8TDE3 154 aaKnown RBP10.93□□□□□ -0.66
CD48-201ENST00000368045 MRAP2Q96G30 205 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 HLA-DRB4X5D2U9 266 aa10.93□□□□□ -0.66
CD48-201ENST00000368045 IGHV3-49A0A0A0MS15 119 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 FOXE3Q13461 319 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 KIR3DS1Q14943 382 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 NRACQ8N912 160 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 TMEM158Q8WZ71 300 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 USMG5Q96IX5 58 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 HIGD1BQ9P298 99 aa10.92□□□□□ -0.66
CD48-201ENST00000368045 IGKCP01834 107 aa10.91□□□□□ -0.66
CD48-201ENST00000368045 PRSS1P07477 247 aa10.91□□□□□ -0.66
CD48-201ENST00000368045 RBX1P62877 108 aa10.91□□□□□ -0.66
CD48-201ENST00000368045 SPANXN1Q5VSR9 72 aa10.91□□□□□ -0.66
CD48-201ENST00000368045 TMEM219Q86XT9 240 aa10.91□□□□□ -0.66
CD48-201ENST00000368045 C18orf15Q96N68 181 aa10.91□□□□□ -0.66
CD48-201ENST00000368045 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
CD48-201ENST00000368045 DPM2O94777 84 aa10.9□□□□□ -0.66
CD48-201ENST00000368045 IGHV4-39P01824 125 aa10.9□□□□□ -0.66
CD48-201ENST00000368045 GATA1P15976 413 aaPredicted RBP10.9□□□□□ -0.66
CD48-201ENST00000368045 NMUP48645 174 aa10.9□□□□□ -0.66
CD48-201ENST00000368045 LAGE3Q14657 143 aa10.9□□□□□ -0.66
CD48-201ENST00000368045 OR10J6PQ8NGY7 276 aa10.9□□□□□ -0.66
CD48-201ENST00000368045 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 SMIM17P0DL12 118 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 MED14OSP0DP75 135 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 CDKN1BP46527 198 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 WFDC3Q8IUB2 231 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 MYOZ3Q8TDC0 251 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 AP1S3Q96PC3 154 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 PIMREGQ9BSJ6 248 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 HHLA3Q9XRX5 114 aa10.9□□□□□ -0.67
CD48-201ENST00000368045 HRNRQ86YZ3 2850 aaPredicted RBP10.89□□□□□ -0.67
CD48-201ENST00000368045 TRAV21A0A0B4J279 112 aa10.89□□□□□ -0.67
CD48-201ENST00000368045 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
CD48-201ENST00000368045 SOCS3O14543 225 aa10.89□□□□□ -0.67
CD48-201ENST00000368045 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.67
CD48-201ENST00000368045 ERASQ7Z444 233 aa10.89□□□□□ -0.67
CD48-201ENST00000368045 PCP2Q8IVA1 136 aa10.89□□□□□ -0.67
CD48-201ENST00000368045 UFC1Q9Y3C8 167 aa10.89□□□□□ -0.67
CD48-201ENST00000368045 GTF2H5Q6ZYL4 71 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 FOXC2Q99958 501 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 PRORYQ9H606 182 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 K7EMI3 77 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 NDUFS8O00217 210 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 IGHG2P01859 326 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 UQCRFS1P47985 274 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 LY6DQ14210 128 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
CD48-201ENST00000368045 IGF2RP11717 2491 aa10.87□□□□□ -0.67
CD48-201ENST00000368045 GAGE10A6NGK3 116 aa10.87□□□□□ -0.67
CD48-201ENST00000368045 H3BVH4 76 aa10.87□□□□□ -0.67
CD48-201ENST00000368045 C19orf84I3L1E1 186 aa10.87□□□□□ -0.67
CD48-201ENST00000368045 PRR9Q5T870 116 aa10.87□□□□□ -0.67
CD48-201ENST00000368045 C20orf78Q9BR46 151 aa10.87□□□□□ -0.67
CD48-201ENST00000368045 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
CD48-201ENST00000368045 DCHS2Q6V1P9 2916 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 LRBAP50851 2863 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 WNK2Q9Y3S1 2297 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 TRAV40A0A0B4J280 105 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 A6NDX4 124 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 ASIPP42127 132 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 APRG1Q8IVJ8 170 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 FAM19A4Q96LR4 140 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 SMIM2Q9BVW6 85 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 TACC2O95359 2948 aa10.86□□□□□ -0.67
CD48-201ENST00000368045 IGHV3OR16-10A0A075B7F0 116 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 A0A087WX48 190 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 TRAV12-1A0A0B4J245 112 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 M0R381 172 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 SLC25A16P16260 332 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 PLNP26678 52 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 ORMDL2Q53FV1 153 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms